RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 DIRC2Q96SL1 478 aa4.52□□□□□ -1.69
LIMA1-212ENST00000552491 RTL8AQ9BWD3 113 aa4.52□□□□□ -1.69
LIMA1-212ENST00000552491 TTTY12Q9BZ98 90 aa4.52□□□□□ -1.69
LIMA1-212ENST00000552491 PATZ1Q9HBE1 687 aaKnown RBP4.52□□□□□ -1.69
LIMA1-212ENST00000552491 FKBP11Q9NYL4 201 aa4.52□□□□□ -1.69
LIMA1-212ENST00000552491 POLDIP2Q9Y2S7 368 aa4.52□□□□□ -1.69
LIMA1-212ENST00000552491 LOXL2Q9Y4K0 774 aa4.52□□□□□ -1.69
LIMA1-212ENST00000552491 PXMP4Q9Y6I8 212 aa4.52□□□□□ -1.69
LIMA1-212ENST00000552491 GRIFINA4D1Z8 144 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SH2D1BO14796 132 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 RAB29O14966 203 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 PROP1O75360 226 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 WISP2O76076 250 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SCGB1D1O95968 90 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 HAND1O96004 215 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 OR9G9P0C7N8 305 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 HNF1AP20823 631 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 G0S2P27469 103 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 ADMP35318 185 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SSTR5P35346 364 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 EDDM3BP56851 147 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 CATR1Q13166 79 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SSPNQ14714 243 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 C1orf194Q5T5A4 169 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 CST9LP1Q5W188 147 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 CYB5R2Q6BCY4 276 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 FIP1L1Q6UN15 594 aaKnown RBP4.51□□□□□ -1.69
LIMA1-212ENST00000552491 TCTEX1D1Q8N7M0 179 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 MRGPRDQ8TDS7 321 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 COQ2Q96H96 371 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 FAM173AQ9BQD7 235 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 DCTN5Q9BTE1 182 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 QTRT1Q9BXR0 403 aaKnown RBP4.51□□□□□ -1.69
LIMA1-212ENST00000552491 ELOVL5Q9NYP7 299 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 KCNIP1Q9NZI2 227 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SIT1Q9Y3P8 196 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 TRAPPC1Q9Y5R8 145 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 GPR179Q6PRD1 2367 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 TNCP24821 2201 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 KIR2DL5BA0A0G2JN68 375 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 KIR2DL5BA0A0G2JPC4 375 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 DEFB108AA8MXU0 73 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 M0R143 59 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SMPD2O60906 423 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 CLDN14O95500 239 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 RAC2P15153 192 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 THBS3P49746 956 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 DUSP3P51452 185 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SOX8P57073 446 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 PPP1CBP62140 327 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 LINC00696Q6ZRV3 163 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 C11orf53Q8IXP5 236 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 KIR2DL5AQ8N109 375 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SGMS2Q8NHU3 365 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 RFESDQ8TAC1 157 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 Q8TCH9 128 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 RAB1CQ92928 201 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 GALMQ96C23 342 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 PLPPR2Q96GM1 343 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 C1orf159Q96HA4 380 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 KCNIP2Q9NS61 270 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 B4GALT7Q9UBV7 327 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 WDR83OSQ9Y284 106 aa4.51□□□□□ -1.69
LIMA1-212ENST00000552491 SCO2A0A1W2PP80 73 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 TMEM210A6NLX4 147 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 F2Z2F3 143 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 F6UZH7 168 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 YPEL1O60688 119 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 RBMXL2O75526 392 aaKnown RBP4.5□□□□□ -1.69
LIMA1-212ENST00000552491 ARL14EPLP0DKL9 152 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 OR10J1P30954 320 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 MPV17P39210 176 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 TDGF1P3P51864 188 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 YPEL3P61236 119 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-212ENST00000552491 PSG7Q13046 419 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 OR1C1Q15619 314 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 HLA-DRB5Q30154 266 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 Q6ZWC4 215 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 H2BFWTQ7Z2G1 175 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 MCEMP1Q8IX19 187 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 SLC25A40Q8TBP6 338 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 SDSLQ96GA7 329 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 SFRP2Q96HF1 295 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 YPEL2Q96QA6 119 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 TXNDC17Q9BRA2 123 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 NAGKQ9UJ70 344 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 RNF114Q9Y508 228 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 CFAP47Q6ZTR5 3102 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 TRAV3A0A0B4J244 114 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 TMEM30CPA0ZSE6 113 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 MARCH11A6NNE9 402 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 J3QW42 95 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 K7EN84 100 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 AQP7O14520 342 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 RAB4AP20338 218 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 CBLN1P23435 193 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 CD1BP29016 333 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 CDKN1AP38936 164 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 FOXF2Q12947 444 aa4.5□□□□□ -1.69
LIMA1-212ENST00000552491 UTF1Q5T230 341 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms