RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 THBS3P49746 956 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 TMEM241Q24JQ0 296 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 PLA2G2CQ5R387 149 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 ZADH2Q8N4Q0 377 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 H1FXQ92522 213 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 SPOCK3Q9BQ16 436 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 CLCF1Q9UBD9 225 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 TMPRSS2O15393 492 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 GATA2P23769 480 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ATP5G3P48201 142 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 TMEM147Q9BVK8 224 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 PARLQ9H300 379 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 SVEP1Q4LDE5 3571 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 CDC34P49427 236 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 BSXQ3C1V8 233 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ASPHD1Q5U4P2 390 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ZNF66Q6ZN08 573 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ZNF383Q8NA42 475 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 GGACTQ9BVM4 153 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ACTR3CQ9C0K3 210 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 NDUFB4O95168 129 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 S100A8P05109 93 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 SOD3P08294 240 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 BRWD1-AS2P59051 145 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ACSF3Q4G176 576 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 MRGPRGQ86SM5 289 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 CA5BP1Q8WTZ4 195 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 NPCDR1Q9BY65 106 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 ENY2Q9NPA8 101 aa11.38□□□□□ -0.59
PRPF40B-209ENST00000548825 UBE2CO00762 179 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 ZNF134P52741 427 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 SNIP1Q8TAD8 396 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 MBNL3Q9NUK0 354 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 IGKV1D-17A0A075B6S4 117 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 GALR1P47211 349 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 CD81P60033 236 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 PRSS8Q16651 343 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 MOB3BQ86TA1 216 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 STARD4Q96DR4 205 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 LRFN3Q9BTN0 628 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 HIPK2Q9H2X6 1198 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 FUT9Q9Y231 359 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 TP53TG5Q9Y2B4 290 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 DLX1P56177 255 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 KLF3P57682 345 aaPredicted RBP11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 PRR31Q5SQ13 230 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 FAM78BQ5VT40 261 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 LHFPL4Q7Z7J7 247 aa11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 METTL1Q9UBP6 276 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-209ENST00000548825 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 DVL1O14640 695 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 CD1BP29016 333 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 SELENOVP59797 346 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 PYY3Q5JQD4 70 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 C22orf34Q6ZV56 151 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 CCL17Q92583 94 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 IFNL4K9M1U5 179 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 PHOX2AO14813 284 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 SLC35B1P78383 322 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 FAM209BQ5JX69 171 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 GCSAMQ8N6F7 178 aa11.36□□□□□ -0.59
PRPF40B-209ENST00000548825 SERF2P84101 59 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 SLC35E4Q6ICL7 350 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 SLC35E3Q7Z769 313 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 CISD1Q9NZ45 108 aaKnown RBP11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 TMEM210A6NLX4 147 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 SMIM6P0DI80 62 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 MLANAQ16655 118 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 ABHD5Q8WTS1 349 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 TUBA4BQ9H853 241 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 SDF2L1Q9HCN8 221 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 A0A1B0GUS0 222 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 CXorf65A6NEN9 183 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 FOLR2P14207 255 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 TNFAIP6P98066 277 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 PPP1R35Q8TAP8 253 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 HSPB7Q9UBY9 170 aa11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 KLF2Q9Y5W3 355 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-209ENST00000548825 TRBV6-6A0A0A6YYG2 114 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 CISD2Q8N5K1 135 aaKnown RBP11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 EDARADDQ8WWZ3 215 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 DSCAMO60469 2012 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 IGHV3-72A0A0B4J1Y9 119 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 ZNF320A2RRD8 509 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 OR10J4P0C629 311 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 SRSF7Q16629 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 ZNF474Q6S9Z5 364 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 EGLN1Q9GZT9 426 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 CALYQ9NYX4 217 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 IGHV3-21A0A0B4J1V1 117 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms