RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CD36P16671 472 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 SDC2P34741 201 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 PRSS8Q16651 343 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 USMG5Q96IX5 58 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 PHB2Q99623 299 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 TINAGL1Q9GZM7 467 aaPredicted RBP12.43□□□□□ -0.42
DDX55-212ENST00000544738 COA4Q9NYJ1 87 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 MSGN1A6NI15 193 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 GP9P14770 177 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 NFYAP23511 347 aaPredicted RBP12.42□□□□□ -0.42
DDX55-212ENST00000544738 TNXAQ16473 311 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 LGALS14Q8TCE9 139 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 NUDCD2Q8WVJ2 157 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 DCUN1D5Q9BTE7 237 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 OR51E2Q9H255 320 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 RHBDL2Q9NX52 303 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 ANXA10Q9UJ72 324 aa12.42□□□□□ -0.42
DDX55-212ENST00000544738 MRPS7Q9Y2R9 242 aaKnown RBP12.42□□□□□ -0.42
DDX55-212ENST00000544738 ANKRD34BA5PLL1 514 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 J3QRK9 145 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 ACTL6BO94805 426 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 OR9G9P0C7N8 305 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 CDK10Q15131 360 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 MRGPRG-AS1Q2M3A8 158 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 KCTD9Q7L273 389 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 MMD2Q8IY49 270 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 SRSF12Q8WXF0 261 aaKnown RBP12.41□□□□□ -0.42
DDX55-212ENST00000544738 ACOT12Q8WYK0 555 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 RBMX2Q9Y388 322 aaKnown RBP12.41□□□□□ -0.42
DDX55-212ENST00000544738 ETV7Q9Y603 341 aa12.41□□□□□ -0.42
DDX55-212ENST00000544738 A0A0A6YYH2 397 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 A6NJ64 397 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 MPPED1O15442 326 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 FCGR3BO75015 233 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 TMEM127O75204 238 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 TUSC2O75896 110 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 SAA1P0DJI8 122 aaPredicted RBP12.4□□□□□ -0.42
DDX55-212ENST00000544738 MXD1Q05195 221 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 KLF5Q13887 457 aaPredicted RBP12.4□□□□□ -0.42
DDX55-212ENST00000544738 TATDN3Q17R31 274 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 ZNF343Q6P1L6 599 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 IDO2Q6ZQW0 420 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 ANKRD13BQ86YJ7 626 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 HSD17B10Q99714 261 aaKnown RBP12.4□□□□□ -0.42
DDX55-212ENST00000544738 SPIN2AQ99865 258 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 SPIN2BQ9BPZ2 258 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 TM2D3Q9BRN9 247 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 PEF1Q9UBV8 284 aaKnown RBP12.4□□□□□ -0.42
DDX55-212ENST00000544738 ALMS1Q8TCU4 4167 aa12.4□□□□□ -0.42
DDX55-212ENST00000544738 LOC100506127A0A0U1RQW1 187 aa12.39□□□□□ -0.43
DDX55-212ENST00000544738 SSX5O60225 188 aa12.39□□□□□ -0.43
DDX55-212ENST00000544738 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
DDX55-212ENST00000544738 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
DDX55-212ENST00000544738 OR4S2Q8NH73 311 aa12.39□□□□□ -0.43
DDX55-212ENST00000544738 VSTM2AQ8TAG5 236 aa12.39□□□□□ -0.43
DDX55-212ENST00000544738 RSRP1Q9BUV0 290 aa12.39□□□□□ -0.43
DDX55-212ENST00000544738 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
DDX55-212ENST00000544738 DIABLOQ9NR28 239 aa12.39□□□□□ -0.43
DDX55-212ENST00000544738 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 IGKV1D-13A0A0B4J2D9 117 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 FAM223BA6NKX1 122 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 TRIM64CA6NLI5 447 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 CLEC2LP0C7M8 214 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 APELAP0DMC3 54 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 IGKV1-13P0DP09 117 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 ARPC4P59998 168 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 DYRK1AQ13627 763 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 KCTD21Q4G0X4 260 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 IDNKQ5T6J7 187 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 SLC25A42Q86VD7 318 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 FAM223AQ8IWN6 122 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 BEST4Q8NFU0 473 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 OR9G4Q8NGQ1 327 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 TCTEX1D2Q8WW35 142 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 SNAPC3Q92966 411 aa12.38□□□□□ -0.43
DDX55-212ENST00000544738 H0Y980 276 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 IGLV2-14P01704 120 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 RPL30P62888 115 aaKnown RBP12.37□□□□□ -0.43
DDX55-212ENST00000544738 MSMO1Q15800 293 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 NEDD8Q15843 81 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 RPEL1Q2QD12 228 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 TIMM50Q3ZCQ8 353 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 FAM209BQ5JX69 171 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 ZNF66Q6ZN08 573 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 HOGA1Q86XE5 327 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 MFSD4AQ8N468 514 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 TTC9CQ8N5M4 171 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 OR5H6Q8NGV6 325 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 RNF167Q9H6Y7 350 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 SPATA2Q9UM82 520 aa12.37□□□□□ -0.43
DDX55-212ENST00000544738 TNCP24821 2201 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 TRBV9A0A0B4J1U6 114 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 OR2A4O95047 310 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 HRASP01112 189 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 MAS1LP35410 378 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 KIR2DS2P43631 304 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 CBX5P45973 191 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 SYNJ2BPP57105 145 aa12.36□□□□□ -0.43
DDX55-212ENST00000544738 RHOGP84095 191 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms