RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MBD3L1Q8WWY6 194 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 TAAR6Q96RI8 345 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 A0A087WWC5 75 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 IGHV2OR16-5A0A0B4J2B6 119 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
BNIP3-202ENST00000540159 SMIM21Q3B7S5 101 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 ZNF718Q3SXZ3 478 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 INO80CQ6PI98 192 aaPredicted RBP11.36□□□□□ -0.59
BNIP3-202ENST00000540159 TCEAL7Q9BRU2 100 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
BNIP3-202ENST00000540159 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 DCAF16Q9NXF7 216 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 MUC6Q6W4X9 2439 aa11.36□□□□□ -0.59
BNIP3-202ENST00000540159 A0A1B0GUS0 222 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 SPINT2O43291 252 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 NDUFS6O75380 124 aaKnown RBP11.35□□□□□ -0.59
BNIP3-202ENST00000540159 IFNA1P01562 189 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 SNRPCP09234 159 aaKnown RBP11.35□□□□□ -0.59
BNIP3-202ENST00000540159 GAMTQ14353 236 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 SNIP1Q8TAD8 396 aaKnown RBP11.35□□□□□ -0.59
BNIP3-202ENST00000540159 Q8TCH9 128 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 COL12A1Q99715 3063 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 IGKV1D-17A0A075B6S4 117 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 H7BYZ3 331 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 MIC13Q5XKP0 118 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
BNIP3-202ENST00000540159 TRAV1-1A0A0B4J248 108 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 ZZEF1O43149 2961 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 NPPCP23582 126 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 GALR1P47211 349 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 C1QL4Q86Z23 238 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 HIST3H2BBQ8N257 126 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 OR13D1Q8NGV5 346 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 MEGF10Q96KG7 1140 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 AKAP6Q13023 2319 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 TANC2Q9HCD6 1990 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 PMS2P5A8MQ11 134 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 IGHV2-70P01814 119 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 COX5AP20674 150 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 CDC34P49427 236 aaPredicted RBP11.34□□□□□ -0.59
BNIP3-202ENST00000540159 SLC35E4Q6ICL7 350 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 OR4X1Q8NH49 305 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 PINX1Q96BK5 328 aaKnown RBP11.34□□□□□ -0.59
BNIP3-202ENST00000540159 HES4Q9HCC6 221 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 SIRT7Q9NRC8 400 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 DCHS2Q6V1P9 2916 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 C15orf62A8K5M9 175 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 ACTL6BO94805 426 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 NDUFB4O95168 129 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 CLDN14O95500 239 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 ZNF66Q6ZN08 573 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 C22orf34Q6ZV56 151 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 OR4A16Q8NH70 328 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 FUT9Q9Y231 359 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 ATRXP46100 2492 aa11.34□□□□□ -0.59
BNIP3-202ENST00000540159 CTXND1A0A1B0GTU2 59 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 AQP7O14520 342 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 FTH1P19P0C7X4 201 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 MOB3BQ86TA1 216 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 ZNF114Q8NC26 417 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 NAT8Q9UHE5 227 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 A0A1W2PPV4 95 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 TMEM210A6NLX4 147 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 GYPAP02724 150 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 C1QTNF9P0C862 333 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 CD1BP29016 333 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 THBS3P49746 956 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 S100A12P80511 92 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 GCSAMQ8N6F7 178 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 ITLN1Q8WWA0 313 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 PACRGQ96M98 296 aaPredicted RBP11.33□□□□□ -0.6
BNIP3-202ENST00000540159 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
BNIP3-202ENST00000540159 OR6C3Q9NZP0 311 aa11.33□□□□□ -0.6
BNIP3-202ENST00000540159 DUTP33316 252 aaKnown RBP11.32□□□□□ -0.6
BNIP3-202ENST00000540159 PROCRQ9UNN8 238 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 SEC14L6B5MCN3 397 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 KBTBD11O94819 623 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 MAS1LP35410 378 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 FAM78BQ5VT40 261 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 OR10A7Q8NGE5 316 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 RND1Q92730 232 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 OR5B12Q96R08 314 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 DKK4Q9UBT3 224 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
BNIP3-202ENST00000540159 TNFSF13O75888 250 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 PNRC1Q12796 327 aaPredicted RBP11.32□□□□□ -0.6
BNIP3-202ENST00000540159 ACSF3Q4G176 576 aaPredicted RBP11.32□□□□□ -0.6
BNIP3-202ENST00000540159 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 BHLHA15Q7RTS1 189 aaPredicted RBP11.32□□□□□ -0.6
BNIP3-202ENST00000540159 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 MS4A5Q9H3V2 200 aa11.32□□□□□ -0.6
BNIP3-202ENST00000540159 CACNA1BQ00975 2339 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms