RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 ARFGEF3Q5TH69 2177 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 TNCP24821 2201 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 COL6A6A6NMZ7 2263 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 H3BQ15 152 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 IFNA10P01566 189 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 SERF2P84101 59 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 TMEM147Q9BVK8 224 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 SLC25A22Q9H936 323 aa12.48□□□□□ -0.41
USP35-204ENST00000530267 SMCO3A2RU48 225 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 MAP1LC3B2A6NCE7 125 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 C15orf62A8K5M9 175 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 RAB7AP51149 207 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 MRPS11P82912 194 aaKnown RBP12.47□□□□□ -0.41
USP35-204ENST00000530267 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 HEYLQ9NQ87 328 aaPredicted RBP12.47□□□□□ -0.41
USP35-204ENST00000530267 MYOD1P15172 320 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 NQO2P16083 231 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 RAB11AP62491 216 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 ZNF429Q86V71 674 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 ABHD12Q8N2K0 398 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 FAM24BQ8N5W8 94 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 PINX1Q96BK5 328 aaKnown RBP12.47□□□□□ -0.41
USP35-204ENST00000530267 IDI2-AS1Q9NZ38 188 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 SLC25A10Q9UBX3 287 aaPredicted RBP12.47□□□□□ -0.41
USP35-204ENST00000530267 RAXQ9Y2V3 346 aa12.47□□□□□ -0.41
USP35-204ENST00000530267 ASH1LQ9NR48 2969 aaKnown RBP12.46□□□□□ -0.41
USP35-204ENST00000530267 OR8U8P0C7N1 319 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 CCL3L1P16619 93 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 TEX36Q5VZQ5 186 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 ZNF383Q8NA42 475 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 DDB2Q92466 427 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 RHOVQ96L33 236 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 SLC39A9Q9NUM3 307 aa12.46□□□□□ -0.41
USP35-204ENST00000530267 ANKHD1Q8IWZ3 2542 aaKnown RBP12.46□□□□□ -0.41
USP35-204ENST00000530267 LOC102723971A0A1B0GUV8 181 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 ZNF727A8MUV8 499 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 RRHO14718 337 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 FCN3O75636 299 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 HSPB1P04792 205 aaKnown RBP12.46□□□□□ -0.42
USP35-204ENST00000530267 RPL31P62899 125 aaKnown RBP12.46□□□□□ -0.42
USP35-204ENST00000530267 RELBQ01201 579 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 FLI1Q01543 452 aaPredicted RBP12.46□□□□□ -0.42
USP35-204ENST00000530267 RBPJQ06330 500 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 OR4S2Q8NH73 311 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.42
USP35-204ENST00000530267 LHX4Q969G2 390 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 HIST1H2BAQ96A08 127 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 RAB39BQ96DA2 213 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 NPCDR1Q9BY65 106 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 SMDT1Q9H4I9 107 aa12.46□□□□□ -0.42
USP35-204ENST00000530267 TRAV1-1A0A0B4J248 108 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 hCG_1809904A0A1W2PP81 198 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 A0A1W2PR64 198 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 A0A1W2PRV1 198 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 NKX6-3A6NJ46 265 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 OPN1MWP04001 364 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 OPN1MW2P0DN77 364 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 OPN1MW3P0DN78 364 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 KHDC3LQ587J8 217 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 LYPD2Q6UXB3 125 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 HINT2Q9BX68 163 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 ZNF729A6NN14 1252 aaPredicted RBP12.45□□□□□ -0.42
USP35-204ENST00000530267 BCL2P10415 239 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 HOXA1P49639 335 aaPredicted RBP12.45□□□□□ -0.42
USP35-204ENST00000530267 SPCS3P61009 180 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 C15orf54Q8N8G6 183 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 ZNF439Q8NDP4 499 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 OR10G4Q8NGN3 311 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 OR10G9Q8NGN4 311 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 OR10G7Q8NGN6 311 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 MBD3L1Q8WWY6 194 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 PARD6GQ9BYG4 376 aaPredicted RBP12.45□□□□□ -0.42
USP35-204ENST00000530267 DYNLRB1Q9NP97 96 aa12.45□□□□□ -0.42
USP35-204ENST00000530267 TRAV38-1A0A0B4J264 116 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 FAM90A27PA6NNH2 459 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 SHISA9B4DS77 424 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 E7EQL1 145 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 GFRA3O60609 400 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 IGKV1-16P04430 117 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 TAGLN2P37802 199 aaKnown RBP12.44□□□□□ -0.42
USP35-204ENST00000530267 DLK1P80370 383 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 RHEBQ15382 184 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 ATP6V1FQ16864 119 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 ZNF709Q8N972 641 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 LINC01560Q8TB33 94 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 ZCCHC14Q8WYQ9 949 aaKnown RBP12.44□□□□□ -0.42
USP35-204ENST00000530267 EGLN1Q9GZT9 426 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 HIPK2Q9H2X6 1198 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 RAB9BQ9NP90 201 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 MSRB2Q9Y3D2 182 aa12.44□□□□□ -0.42
USP35-204ENST00000530267 PPIAL4EA0A075B759 164 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 hADV38S2A0JD32 116 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 PPIAL4DF5H284 164 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 TMEM178BH3BS89 294 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms