RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 VAX1Q5SQQ9 334 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 KIR2DL5AQ8N109 375 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 SLC25A40Q8TBP6 338 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 SMIM7Q9BQ49 75 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 RTBDNQ9BSG5 229 aaPredicted RBP8.37□□□□□ -1.07
USP35-201ENST00000526425 CCL28Q9NRJ3 127 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 WNK2Q9Y3S1 2297 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 TNRC6BQ9UPQ9 1833 aaKnown RBP8.37□□□□□ -1.07
USP35-201ENST00000526425 IGHV2-70DA0A0C4DH43 119 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 ZNF503-AS2A6NEH8 195 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 DEFB108AA8MXU0 73 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 M0R1B8 84 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 APOA2P02652 100 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 OPN1MWP04001 364 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 ZNF708P17019 499 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 FFAR4Q5NUL3 377 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 ASCL5Q7RTU5 278 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 STPG3Q8N7X2 389 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 OR5AU1Q8NGC0 362 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 FNDC4Q9H6D8 234 aaPredicted RBP8.37□□□□□ -1.07
USP35-201ENST00000526425 ZDHHC11Q9H8X9 412 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 IGHV3-43A0A0B4J1X8 118 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 WISP2O76076 250 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 CDS2O95674 445 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 PPYP01298 95 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 IGHV3-43DP0DP04 118 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 EDDM3BP56851 147 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 RELBQ01201 579 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 RTL8AQ9BWD3 113 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 RAB18Q9NP72 206 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 TMEM106BQ9NUM4 274 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 KCNIP1Q9NZI2 227 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 SPRR3Q9UBC9 169 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 TRAV30A0A087WSZ9 112 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.36□□□□□ -1.07
USP35-201ENST00000526425 MAP1LC3B2A6NCE7 125 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 GFRA3O60609 400 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 HKR1P10072 659 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 CCL1P22362 96 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 UQCRFS1P47985 274 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 GABRA6Q16445 453 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 GAPTQ8N292 157 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 ZNF439Q8NDP4 499 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 MAP1LC3BQ9GZQ8 125 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 WDFY3Q8IZQ1 3526 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 CHD8Q9HCK8 2581 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 ANKRD11Q6UB99 2663 aaPredicted RBP8.36□□□□□ -1.07
USP35-201ENST00000526425 J3KRW8 73 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 IAPPP10997 89 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 LMO1P25800 156 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 ARL3P36405 182 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 OR10V1Q8NGI7 309 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 MANBALQ9NQG1 85 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 OSGIN2Q9Y236 505 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 SRP19P09132 144 aaKnown RBP8.36□□□□□ -1.07
USP35-201ENST00000526425 OTX1P32242 354 aaPredicted RBP8.36□□□□□ -1.07
USP35-201ENST00000526425 NKX2-1P43699 371 aaPredicted RBP8.36□□□□□ -1.07
USP35-201ENST00000526425 TAS2R30P59541 319 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 FAM78BQ5VT40 261 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 IMMP2LQ96T52 175 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 HIF1ANQ9NWT6 349 aa8.36□□□□□ -1.07
USP35-201ENST00000526425 USF3Q68DE3 2245 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 FAM24AA6NFZ4 105 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 FIGNL2A6NMB9 653 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 SH2D1BO14796 132 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 ADAM20O43506 726 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 NUDT3O95989 172 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 AMTP48728 403 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 RUNX1Q01196 453 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 SRD5A3Q9H8P0 318 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 MTCH1Q9NZJ7 389 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 PDE6DO43924 150 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 TCF23Q7RTU1 214 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 OR2Z1Q8NG97 314 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 POM121L2Q96KW2 1035 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 ZNF835Q9Y2P0 537 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 CACNA1BQ00975 2339 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 KIR2DS1A0A191URI9 304 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 NKX2-6A6NCS4 301 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
USP35-201ENST00000526425 DANCRP0C864 163 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 KIR2DS4P43632 304 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 TCTAP57738 103 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
USP35-201ENST00000526425 PAX2Q02962 417 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 RBPJQ06330 500 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 KIR2DS1Q14954 304 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 LFNGQ8NES3 379 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 OR2T10Q8NGZ9 312 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 ZNF391Q9UJN7 358 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 PROCRQ9UNN8 238 aa8.35□□□□□ -1.07
USP35-201ENST00000526425 ARL2-SNX15V9GYD0 113 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms