RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GPR146Q96CH1 333 aa13.84□□□□□ -0.19
PCDHA3-201ENST00000522353 DNAJC4Q9NNZ3 241 aa13.84□□□□□ -0.19
PCDHA3-201ENST00000522353 C17orf51A8MQB3 221 aa13.84□□□□□ -0.19
PCDHA3-201ENST00000522353 NTN3O00634 580 aaPredicted RBP13.84□□□□□ -0.19
PCDHA3-201ENST00000522353 MEF2CQ06413 473 aaPredicted RBP13.84□□□□□ -0.19
PCDHA3-201ENST00000522353 IGHV1-2P23083 117 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 MEOX2P50222 304 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 CRYBA2P53672 197 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 NUTF2P61970 127 aaKnown RBP13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 RUNX1Q01196 453 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 SPTBN1Q01082 2364 aaKnown RBP13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 A0A0G2JMM0 328 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 A0A1W2PPB8 328 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 A0A1W2PRS3 328 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 PGPA6NDG6 321 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 KIR3DP1A8MWS1 328 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 TRGV3P03979 118 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 CFHR1Q03591 330 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 C19orf54Q5BKX5 351 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 SLC25A38Q96DW6 304 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 PACRGQ96M98 296 aaPredicted RBP13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 PRO1933Q9H354 126 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 UBE2L6O14933 153 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 KLF7O75840 302 aaPredicted RBP13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 PTBP3O95758 552 aaKnown RBP13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 PLAUP00749 431 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 SSTR5P35346 364 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 P2RY4P51582 365 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 ZNF146Q15072 292 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 TNFRSF9Q07011 255 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 SLC16A13Q7RTY0 426 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 FAM90A1Q86YD7 464 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 OR51G1Q8NGK1 321 aa13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 OSR1Q8TAX0 266 aaPredicted RBP13.83□□□□□ -0.2
PCDHA3-201ENST00000522353 DOPEY2Q9Y3R5 2298 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 PSMB2P49721 201 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 C19orf24Q9BVV8 132 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 CSRP3P50461 194 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 UCP3P55916 312 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 CBLN4Q9NTU7 201 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 OR5AC2Q9NZP5 309 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 CDC42EP3Q9UKI2 254 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 TMEM14DPA8MWL7 114 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 MIEN1Q9BRT3 115 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 TGFBR3LH3BV60 316 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 EFEMP2O95967 443 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 MT-ND6P03923 174 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 LY6DQ14210 128 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 TWIST1Q15672 202 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 NCMAPQ5T1S8 102 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 POC1AQ8NBT0 407 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 TUBA4BQ9H853 241 aa13.82□□□□□ -0.2
PCDHA3-201ENST00000522353 CBY3A6NI87 242 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 C8orf88P0DMB2 117 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 MFAP2P55001 183 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 FAM3BP58499 235 aaPredicted RBP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 SGMS2Q8NHU3 365 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 TAF15Q92804 592 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 CBY1Q9Y3M2 126 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 TRAF4Q9BUZ4 470 aaPredicted RBP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 RPS20P60866 119 aaKnown RBP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 SELENOHQ8IZQ5 122 aaKnown RBP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 RSG1Q9BU20 258 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 ELF5Q9UKW6 265 aaPredicted RBP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 PIN1P1O15428 100 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 ZFC3H1O60293 1989 aaKnown RBP13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 MIC13Q5XKP0 118 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 DRAM1Q8N682 238 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 IL36RNQ9UBH0 155 aa13.81□□□□□ -0.2
PCDHA3-201ENST00000522353 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 ZNF250P15622 560 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 LHX2P50458 406 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 C1QTNF5Q9BXJ0 243 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 PHLDA3Q9Y5J5 127 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 PSG7Q13046 419 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 GALNT14Q96FL9 552 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 NPDC1Q9NQX5 325 aaPredicted RBP13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 CACNA1BQ00975 2339 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 ESPL1Q14674 2120 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 MEF2BQ02080 365 aaPredicted RBP13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 SRSF9Q13242 221 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 C5orf52A6NGY3 159 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 FAM216BQ8N7L0 139 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 NPFFR1Q9GZQ6 430 aa13.8□□□□□ -0.2
PCDHA3-201ENST00000522353 SDK2Q58EX2 2172 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 CIDEAO60543 219 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 GPX1P07203 203 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 CDKN1AP38936 164 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 CYB561D1Q8N8Q1 229 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 AURKAIP1Q9NWT8 199 aaPredicted RBP13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 TRAV20A0A0B4J274 112 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 ABLIM2Q6H8Q1 611 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 ALPK2Q86TB3 2170 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 XIRP1Q702N8 1843 aaKnown RBP13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 CXCL2P19875 107 aa13.79□□□□□ -0.2
PCDHA3-201ENST00000522353 FAM53AQ6NSI3 398 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms