RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ARL14EPLP0DKL9 152 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 CA6P23280 308 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 HSPB2Q16082 182 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 ANXA2RQ3ZCQ2 193 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 BVES-AS1Q5T3Y7 98 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 LHX8Q68G74 356 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 OSR2Q8N2R0 312 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 KLHDC1Q8N7A1 406 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 SLC37A2Q8TED4 501 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 C19orf24Q9BVV8 132 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 NCOR1P1Q9H4R4 102 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 AKIRIN1Q9H9L7 192 aaPredicted RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF835Q9Y2P0 537 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 POLEQ07864 2286 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 C7orf71A4D174 169 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 LRP5LA4QPB2 252 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 M0R1X1 148 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 RAB9AP51151 201 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 RPL31P62899 125 aaKnown RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 LCN2P80188 198 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 LTC4SQ16873 150 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 CENPVQ7Z7K6 275 aaPredicted RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 PNRC2Q9NPJ4 139 aaKnown RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 ABI3Q9P2A4 366 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 M0R135 149 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 NDUFS8O00217 210 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 BMPR1BO00238 502 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 GATA3P23771 443 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 GUCA1AP43080 201 aaPredicted RBP6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 CRYBA4P53673 196 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 GFERP55789 205 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF324BQ6AW86 544 aaPredicted RBP6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 PQLC2Q6ZP29 291 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 OOSP2Q86WS3 158 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 MUC15Q8N387 334 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 OR8B3Q8NGG8 313 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF799Q96GE5 643 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 FBLN5Q9UBX5 448 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 ADAMTS9Q9P2N4 1935 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 CEP250Q9BV73 2442 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 C5orf49A4QMS7 147 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 OR4C46A6NHA9 309 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 DHRS3O75911 302 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 SYNGR4O95473 234 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 BCL3P20749 454 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF137PP52743 207 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 PAX2Q02962 417 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 KIR2DS3Q14952 304 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 MIC13Q5XKP0 118 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 SLC23A3Q6PIS1 610 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 OR10P1Q8NGE3 313 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 SMIM12Q96EX1 92 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 UCN2Q96RP3 112 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 JMJD8Q96S16 334 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 TIMM29Q9BSF4 260 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 DECR2Q9NUI1 292 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 SLC17A4Q9Y2C5 497 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 YTHDF2Q9Y5A9 579 aaKnown RBP6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 TANC2Q9HCD6 1990 aa6.11□□□□□ -1.43
LIMCH1-207ENST00000508466 TRAV9-2A0A087WT02 112 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 CTXND1A0A1B0GTU2 59 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 TMEM250H0YL14 139 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 S1PR2O95136 353 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 PPIAL4GP0DN37 164 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 F2RP25116 425 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 CLDN15P56746 228 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 YPEL3P61236 119 aaPredicted RBP6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 HBG1P69891 147 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 HBG2P69892 147 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 ARG2P78540 354 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 CRIPAKQ8N1N5 446 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 OR2M7Q8NG81 312 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 CLDN23Q96B33 292 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 KCNS1Q96KK3 526 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 UBE2ZQ9H832 354 aaPredicted RBP6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 ATG2AQ2TAZ0 1938 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 PPIAL4CA0A0B4J2A2 164 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 MLNRO43193 412 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 TSPAN2O60636 221 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 MT-CO2P00403 227 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 MT-ATP6P00846 226 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 OR10J4P0C629 311 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 USF1P22415 310 aaPredicted RBP6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 CRYBB3P26998 211 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 PLP1P60201 277 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 ATP5G2Q06055 141 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 FOXL1Q12952 345 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 VWA1Q6PCB0 445 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 TRAT1Q6PIZ9 186 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 WDR5BQ86VZ2 330 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 TEX45Q8NA69 505 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 LRRC61Q9BV99 259 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 OR2D2Q9H210 308 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 KLRF1Q9NZS2 232 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 TEX48A0A1B0GUV7 120 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 BLACEA4D250 179 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 AHRRA9YTQ3 701 aa6.1□□□□□ -1.43
LIMCH1-207ENST00000508466 PLXNB1O43157 2135 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms