RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 VSTM2AQ8TAG5 236 aa18.25■□□□□ 0.51
CTDSP1-211ENST00000492545 SPIN2AQ99865 258 aa18.25■□□□□ 0.51
CTDSP1-211ENST00000492545 SPIN2BQ9BPZ2 258 aa18.25■□□□□ 0.51
CTDSP1-211ENST00000492545 TINAGL1Q9GZM7 467 aaPredicted RBP18.25■□□□□ 0.51
CTDSP1-211ENST00000492545 LSM4Q9Y4Z0 139 aaKnown RBP18.25■□□□□ 0.51
CTDSP1-211ENST00000492545 TNCP24821 2201 aa18.25■□□□□ 0.51
CTDSP1-211ENST00000492545 SORL1Q92673 2214 aa18.25■□□□□ 0.51
CTDSP1-211ENST00000492545 FCGR2CP31995 323 aa18.24■□□□□ 0.51
CTDSP1-211ENST00000492545 RPS19P39019 145 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-211ENST00000492545 EIF4EBP1Q13541 118 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-211ENST00000492545 ACSM6Q6P461 480 aa18.24■□□□□ 0.51
CTDSP1-211ENST00000492545 GVQW1Q8N7I0 195 aa18.24■□□□□ 0.51
CTDSP1-211ENST00000492545 SRSF12Q8WXF0 261 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-211ENST00000492545 NHLRC4P0CG21 123 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 SAA1P0DJI8 122 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 KIR2DS2P43631 304 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 RPL30P62888 115 aaKnown RBP18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 TNXAQ16473 311 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 UBE2NLQ5JXB2 153 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 VAX1Q5SQQ9 334 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 MFSD4AQ8N468 514 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 TCTEX1D2Q8WW35 142 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 ACOT12Q8WYK0 555 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 KCTD12Q96CX2 325 aaKnown RBP18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 PRR25Q96S07 402 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 AIFM2Q9BRQ8 373 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 ZNF430Q9H8G1 570 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 COL7A1Q02388 2944 aa18.23■□□□□ 0.51
CTDSP1-211ENST00000492545 TRIM64CA6NLI5 447 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 SAP30O75446 220 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 OR9G9P0C7N8 305 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 IDO2Q6ZQW0 420 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 OR5AP2Q8NGF4 316 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 OR6Q1Q8NGQ2 317 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 OR13F1Q8NGS4 319 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 GIMAP1Q8WWP7 306 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 OR4C12Q96R67 309 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 ELOVL1Q9BW60 279 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 COA4Q9NYJ1 87 aa18.22■□□□□ 0.51
CTDSP1-211ENST00000492545 MPPED1O15442 326 aa18.21■□□□□ 0.51
CTDSP1-211ENST00000492545 HRASP01112 189 aa18.21■□□□□ 0.51
CTDSP1-211ENST00000492545 PPYP01298 95 aa18.21■□□□□ 0.51
CTDSP1-211ENST00000492545 ADAD2Q8NCV1 583 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-211ENST00000492545 BORCS5Q969J3 196 aa18.21■□□□□ 0.51
CTDSP1-211ENST00000492545 TAS2R8Q9NYW2 309 aa18.21■□□□□ 0.51
CTDSP1-211ENST00000492545 OR2A4O95047 310 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 MAS1LP35410 378 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 ZNF343Q6P1L6 599 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 SLC25A42Q86VD7 318 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 SECTM1Q8WVN6 248 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 SLC25A46Q96AG3 418 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 OR2A7Q96R45 310 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 IFT46Q9NQC8 304 aa18.2■□□□□ 0.5
CTDSP1-211ENST00000492545 RBFOX2O43251 390 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 TGFBR1P36897 503 aa18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 LSM3P62310 102 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 OR2B11Q5JQS5 317 aa18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 TMEM69Q5SWH9 247 aa18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 SAMD12Q8N8I0 201 aa18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 SNAPC3Q92966 411 aa18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 CMTM3Q96MX0 182 aa18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 PEF1Q9UBV8 284 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-211ENST00000492545 FAM223BA6NKX1 122 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 LY86O95711 162 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 FAM209BQ5JX69 171 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 FAM223AQ8IWN6 122 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 PUSL1Q8N0Z8 303 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 TTC9CQ8N5M4 171 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 TMEM167AQ8TBQ9 72 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 SLC5A7Q9GZV3 580 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 CCL28Q9NRJ3 127 aa18.18■□□□□ 0.5
CTDSP1-211ENST00000492545 KBTBD11O94819 623 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 BRWD1-AS2P59051 145 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 CATR1Q13166 79 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 DYRK1AQ13627 763 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 KLF5Q13887 457 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 TATDN3Q17R31 274 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 DHRS11Q6UWP2 260 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 OR4A5Q8NH83 315 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 CD300LFQ8TDQ1 290 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 FUNDC2Q9BWH2 189 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 SMAD5-AS1Q9Y6J3 95 aa18.17■□□□□ 0.5
CTDSP1-211ENST00000492545 TRBV9A0A0B4J1U6 114 aa18.16■□□□□ 0.5
CTDSP1-211ENST00000492545 APELAP0DMC3 54 aa18.16■□□□□ 0.5
CTDSP1-211ENST00000492545 PTHLHP12272 177 aa18.16■□□□□ 0.5
CTDSP1-211ENST00000492545 TAS2R20P59543 309 aa18.16■□□□□ 0.5
CTDSP1-211ENST00000492545 VKORC1L1Q8N0U8 176 aa18.16■□□□□ 0.5
CTDSP1-211ENST00000492545 ANAPC10Q9UM13 185 aa18.16■□□□□ 0.5
CTDSP1-211ENST00000492545 SMIM31A0A1B0GVY4 71 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 ANKRD34BA5PLL1 514 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 PRSS3P35030 304 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 TAS2R46P59540 309 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 HERV-K104P61576 105 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 RHOGP84095 191 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 SPAG16Q8N0X2 631 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 NECAP1Q8NC96 275 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 ZNF257Q9Y2Q1 563 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 DNAH9Q9NYC9 4486 aa18.15■□□□□ 0.5
CTDSP1-211ENST00000492545 TNFSF12O43508 249 aa18.14■□□□□ 0.49
CTDSP1-211ENST00000492545 APOA1P02647 267 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms