RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 GYPCP04921 128 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 CRYGDP07320 174 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 MRPL3P09001 348 aaKnown RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 PAEPP09466 180 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 FBP1P09467 338 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 DNAH10OSP0CZ25 163 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 INAFM2P0DMQ5 153 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 SERPINB1P30740 379 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 PSMB2P49721 201 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC18A1P54219 525 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 DEFA3P59666 94 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 EMX1Q04741 257 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ADIGQ0VDE8 80 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM241Q24JQ0 296 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ARHGAP11BQ3KRB8 267 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC00303Q3SY05 128 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 LIN52Q52LA3 116 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ORMDL2Q53FV1 153 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 COA6Q5JTJ3 125 aaKnown RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 NXNL2Q5VZ03 156 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 LCN8Q6JVE9 175 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 UNQ9165/PRO28630Q6UXU0 137 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 Q6ZSR6 202 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF550Q7Z398 422 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC00596Q86U02 117 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 C1orf158Q8N1D5 194 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 JOSD2Q8TAC2 188 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF420Q8TAQ5 688 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 WFDC5Q8TCV5 224 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 C2orf15Q8WU43 125 aaKnown RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 PTX4Q96A99 478 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ELSPBP1Q96BH3 223 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 DIRAS2Q96HU8 199 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM101Q96IK0 257 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 NRIP2Q9BQI9 281 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 OR52D1Q9H346 318 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 C12orf10Q9HB07 376 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 PLSCR3Q9NRY6 295 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 TAS2R1Q9NYW7 299 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC35A3Q9Y2D2 325 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 LSM5Q9Y4Y9 91 aaKnown RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 RAI1Q7Z5J4 1906 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 BPTFQ12830 3046 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ZZEF1O43149 2961 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 PIKFYVEQ9Y2I7 2098 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 SCN2AQ99250 2005 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 MYH10P35580 1976 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 CEP250Q9BV73 2442 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 AKAP13Q12802 2813 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 IGHV2-26A0A0B4J1V2 119 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 IGHV3-74A0A0B4J1X5 117 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 IGKV1-6A0A0C4DH72 117 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 ZFP92A6NM28 416 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 M0QYV0 167 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 MFSD11O43934 449 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 SERF1AO75920 110 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 OR2A4O95047 310 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 DHFRP00374 187 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 IGLV3-27P01718 113 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 OR4A8P0C604 315 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 SEC11BP0C7V7 166 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 CECR9P0C854 216 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 S100A2P29034 98 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 H2BFSP57053 126 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC00313P59037 77 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 RPS20P60866 119 aaKnown RBP2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 PSPHP78330 225 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 DEFA6Q01524 100 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 DAZ2Q13117 558 aaKnown RBP2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 GINS1Q14691 196 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM183BQ1AE95 376 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 C9orf129Q5T035 196 aaKnown RBP2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 GLYATQ6IB77 296 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM71E1Q6IPT2 247 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 C3orf33Q6P1S2 294 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 Q6ZS52 159 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM183AQ8IXX5 376 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 DEFB106AQ8N104 65 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 OR52L1Q8NGH7 329 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 OR13D1Q8NGV5 346 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 OR2A7Q96R45 310 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 THTPAQ9BU02 230 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 MIXL1Q9H2W2 232 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 PARP11Q9NR21 331 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 DAZ3Q9NR90 486 aaKnown RBP2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 OPTCQ9UBM4 332 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 GLS2Q9UI32 602 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 NEU3Q9UQ49 428 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 OR51B4Q9Y5P0 310 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM56-RWDD3S4R434 201 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 ABCA7Q8IZY2 2146 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 SPTBN2O15020 2390 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 TICRRQ7Z2Z1 1910 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 KMT2EQ8IZD2 1858 aa2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 NUP210Q8TEM1 1887 aaPredicted RBP2.18□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM186AA6NE01 2351 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 A0A087X0T9 212 aa2.17□□□□□ -2.06
DEPDC1-204ENST00000489862 A0A0U1RQV1 116 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms