RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ULBP2Q9BZM5 246 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 CHST5Q9GZS9 411 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 NAA50Q9GZZ1 169 aaKnown RBP3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 ABCG5Q9H222 651 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 ALG9Q9H6U8 611 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 SMCO4Q9NRQ5 59 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 COMMD3Q9UBI1 195 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 VPS29Q9UBQ0 182 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 Q9UF83 564 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 RIMS3Q9UJD0 308 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC35A3Q9Y2D2 325 aa3.4□□□□□ -1.87
HMGB3P5-201ENST00000428894 DOCK11Q5JSL3 2073 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPIAL4EA0A075B759 164 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 TRAV9-2A0A087WT02 112 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPIAL4CA0A0B4J2A2 164 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGHV1-18A0A0C4DH31 117 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 C13orf42A0A1B0GVH6 325 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 A0A1B0GVI7 797 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 TRAPPC13A5PLN9 417 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPIAL4DF5H284 164 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 M0QXV9 152 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 UPK1AO00322 258 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC17A3O00476 420 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 DLGAP1O14490 977 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 EI24O14681 340 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 RAB29O14966 203 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 AZIN1O14977 448 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 EFNA2O43921 213 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 NME6O75414 186 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 S1PR2O95136 353 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGHV3-9P01782 118 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGHV2-5P01817 119 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 C1QCP02747 245 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 MT-ND4LP03901 98 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 ADRA2AP08913 450 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPIAL4FP0DN26 164 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF44P15621 663 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 AKR1C4P17516 323 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 MDKP21741 143 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 COL8A2P25067 703 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 NTSP30990 170 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 RBMXP38159 391 aaKnown RBP3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPT1P50897 306 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 NCBP2P52298 156 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 BAXQ07812 192 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 FOXF1Q12946 379 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 CLINT1Q14677 625 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC36A2Q495M3 483 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 GGTA1PQ4G0N0 100 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 SPIN4Q56A73 249 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 OCIAD2Q56VL3 154 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 PDZD11Q5EBL8 140 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 NXNL2Q5VZ03 156 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 LAMTOR1Q6IAA8 161 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 LEG1Q6P5S2 330 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 KCNIP4Q6PIL6 250 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM107Q6UX40 140 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 TCF24Q7RTU0 167 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 GOLGA7Q7Z5G4 137 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZCCHC24Q8N2G6 241 aaKnown RBP3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR2L13Q8N349 312 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 CDRT4Q8N9R6 151 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZSCAN4Q8NAM6 433 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR4P4Q8NGL7 312 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR1K1Q8NGR3 316 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR10X1Q8NGY0 326 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR2T4Q8NH00 348 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR4S2Q8NH73 311 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 GPR119Q8TDV5 335 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 CASTOR1Q8WTX7 329 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM239Q8WW34 195 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 CCDC126Q96EE4 140 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 MRPS24Q96EL2 167 aaKnown RBP3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 RDH12Q96NR8 316 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 GPR22Q99680 433 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 SULT4A1Q9BR01 284 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 RSG1Q9BU20 258 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 C20orf85Q9H1P6 137 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 MED28Q9H204 178 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 C1orf198Q9H425 327 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM231Q9H6L2 316 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF665Q9H7R5 613 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 LGALS13Q9UHV8 139 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF391Q9UJN7 358 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 POMPQ9Y244 141 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 TRAPPC4Q9Y296 219 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 ARHGAP32A7KAX9 2087 aa3.39□□□□□ -1.87
HMGB3P5-201ENST00000428894 PLXNB1O43157 2135 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 TRAV39A0A0B4J263 110 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM129A0AVI4 362 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CLPSL1A2RUU4 121 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR6C6A6NF89 314 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR5H14A6NHG9 310 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF705EA8MWA4 302 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF99A8MXY4 864 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 LYNX1G3V0Z9 82 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 GPR31O00270 319 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR7A17O14581 309 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPP1R2P9O14990 202 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 EIF4E2O60573 245 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms