RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 SLC25A53Q5H9E4 307 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 GOLT1AQ6ZVE7 132 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 MGST2Q99735 147 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 KNL1Q8NG31 2342 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 MALP21145 153 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 CBLN1P23435 193 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 SOX8P57073 446 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 ATXN8Q156A1 80 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 ACSF3Q4G176 576 aaPredicted RBP11.95□□□□□ -0.5
RERE-204ENST00000400908 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 ZNF645Q8N7E2 425 aa11.95□□□□□ -0.5
RERE-204ENST00000400908 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
RERE-204ENST00000400908 SSBP3Q9BWW4 388 aaPredicted RBP11.95□□□□□ -0.5
RERE-204ENST00000400908 NPIPB4C9JG80 1138 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
RERE-204ENST00000400908 ASIPP42127 132 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
RERE-204ENST00000400908 CYSLTR1Q9Y271 337 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 FOXI3A8MTJ6 420 aaPredicted RBP11.94□□□□□ -0.5
RERE-204ENST00000400908 THY1P04216 161 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 COX14Q96I36 57 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 CDC42EP2O14613 210 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 SIGLEC14Q08ET2 396 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 ZNF658BQ4V348 819 aaPredicted RBP11.94□□□□□ -0.5
RERE-204ENST00000400908 TMEM222Q9H0R3 208 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 NHP2Q9NX24 153 aaKnown RBP11.94□□□□□ -0.5
RERE-204ENST00000400908 MBD1Q9UIS9 605 aaPredicted RBP11.94□□□□□ -0.5
RERE-204ENST00000400908 INO80CQ6PI98 192 aaPredicted RBP11.94□□□□□ -0.5
RERE-204ENST00000400908 TRAV24A0A0B4J272 114 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 LIPT2A6NK58 231 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 MGST3O14880 152 aa11.94□□□□□ -0.5
RERE-204ENST00000400908 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
RERE-204ENST00000400908 NPPCP23582 126 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
RERE-204ENST00000400908 TLNRD1Q9H1K6 362 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 NUTF2P61970 127 aaKnown RBP11.93□□□□□ -0.5
RERE-204ENST00000400908 MAJINQ3KP22 176 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 CRPP02741 224 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 VAX1Q5SQQ9 334 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 OR4X2Q8NGF9 303 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 LOC390937A0A1W2PQ73 354 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 HOXA3O43365 443 aaPredicted RBP11.93□□□□□ -0.5
RERE-204ENST00000400908 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
RERE-204ENST00000400908 M0R381 172 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 CENPWQ5EE01 88 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 RBM38Q9H0Z9 239 aaKnown RBP11.92□□□□□ -0.5
RERE-204ENST00000400908 WDR54Q9H977 334 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 FAM90A26D6RGX4 464 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 KLF4O43474 513 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 TIMM23BQ5SRD1 257 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 C1orf185Q5T7R7 199 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 SFXN3Q9BWM7 321 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 ZNF71Q9NQZ8 489 aaPredicted RBP11.92□□□□□ -0.5
RERE-204ENST00000400908 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
RERE-204ENST00000400908 PRDM13Q9H4Q3 707 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 H3BTX0 84 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 TDGF1P3P51864 188 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 CBLN3Q6UW01 205 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 LHFPL4Q7Z7J7 247 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 RNF182Q8N6D2 247 aa11.92□□□□□ -0.5
RERE-204ENST00000400908 MRPL20Q9BYC9 149 aaKnown RBP11.92□□□□□ -0.5
RERE-204ENST00000400908 MPTX1A8MV57 137 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 LGALS1P09382 135 aaKnown RBP11.91□□□□□ -0.5
RERE-204ENST00000400908 UNC119Q13432 240 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
RERE-204ENST00000400908 HIKESHIQ53FT3 197 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 EEF1AKMT3Q96AZ1 226 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 NRTNQ99748 197 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 PRR32B1ATL7 298 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 VENTXO95231 258 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 IGKV3-20P01619 116 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 ZNF688P0C7X2 276 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 PRR7Q8TB68 274 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 SH3BGRL3Q9H299 93 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 A0A1W2PQD3 144 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 SPINK14Q6IE38 97 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 CCL13Q99616 98 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 GSN-AS1Q9NRJ2 163 aa11.91□□□□□ -0.5
RERE-204ENST00000400908 TMEM229AB2RXF0 380 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 WNT2BQ93097 391 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 WDYHV1Q96HA8 205 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 ZNF488Q96MN9 340 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 HSPE1P61604 102 aaKnown RBP11.9□□□□□ -0.5
RERE-204ENST00000400908 C1orf174Q8IYL3 243 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 MARVELD3Q96A59 401 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 PEX7O00628 323 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 SSBP2P81877 361 aaPredicted RBP11.9□□□□□ -0.5
RERE-204ENST00000400908 LDLRAD2Q5SZI1 272 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 NR2C2APQ86WQ0 139 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 SHISA5Q8N114 240 aa11.9□□□□□ -0.5
RERE-204ENST00000400908 APCDD1LQ8NCL9 501 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms