RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 HPRT1P00492 218 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 RPA2P15927 270 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 CCR6P51684 374 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 BLCAPP62952 87 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 A0A0G2JRQ6 117 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 E7EUB6 86 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 KBTBD11O94819 623 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 IL15RAQ13261 267 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 TCTEX1D4Q5JR98 221 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 DRAXINQ8NBI3 349 aaPredicted RBP8.34□□□□□ -1.07
NUP98-205ENST00000397007 SECTM1Q8WVN6 248 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 CITED1Q99966 193 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 C11orf1Q9H5F2 150 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 RAB18Q9NP72 206 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 PITPNC1Q9UKF7 332 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 NUBP2Q9Y5Y2 271 aa8.34□□□□□ -1.07
NUP98-205ENST00000397007 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 HSPA12AO43301 675 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 PIGPP57054 158 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 TMEM219Q86XT9 240 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 FOXRED2Q8IWF2 684 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 A0A0B4J2A0 478 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 TRIM77I1YAP6 450 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 S1PR2O95136 353 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 RLN1P04808 185 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 SPNP16150 400 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 HLA-GP17693 338 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 TMEM17Q86X19 198 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 SELENOHQ8IZQ5 122 aaKnown RBP8.33□□□□□ -1.08
NUP98-205ENST00000397007 CD300LFQ8TDQ1 290 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 SLC35D1Q9NTN3 355 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 SHPKQ9UHJ6 478 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 IGHV3-72A0A0B4J1Y9 119 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 C3orf85A0A1B0GTC6 90 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 FCN1O00602 326 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 SAA1P0DJI8 122 aaPredicted RBP8.33□□□□□ -1.08
NUP98-205ENST00000397007 TMEM11P17152 192 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 SRSF2Q01130 221 aaKnown RBP8.33□□□□□ -1.08
NUP98-205ENST00000397007 ZNF562Q6V9R5 426 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 OR4S2Q8NH73 311 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 WFDC12Q8WWY7 111 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 C20orf85Q9H1P6 137 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 COA4Q9NYJ1 87 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 DMRT1Q9Y5R6 373 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 VWFP04275 2813 aa8.33□□□□□ -1.08
NUP98-205ENST00000397007 SLC25A6P12236 298 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 SRSF4Q08170 494 aaKnown RBP8.32□□□□□ -1.08
NUP98-205ENST00000397007 PRSS8Q16651 343 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 TMEM128Q5BJH2 165 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 ZNF429Q86V71 674 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 MDFIQ99750 246 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 FAM96BQ9Y3D0 163 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 TCRBP04435 133 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 MAS1LP35410 378 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 ANKRD55Q3KP44 614 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 LSM10Q969L4 123 aaKnown RBP8.32□□□□□ -1.08
NUP98-205ENST00000397007 FLYWCH2Q96CP2 140 aaKnown RBP8.32□□□□□ -1.08
NUP98-205ENST00000397007 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 FOXA2Q9Y261 457 aaPredicted RBP8.32□□□□□ -1.08
NUP98-205ENST00000397007 DUXBA0A1W2PPF3 345 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 C7orf66A4D0T2 115 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 IFNA2P01563 188 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 IL5P05113 134 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 CRYGCP07315 174 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 FAUP35544 74 aaKnown RBP8.32□□□□□ -1.08
NUP98-205ENST00000397007 OR4A47Q6IF82 309 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 Q6ZRM9 215 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 MOB3BQ86TA1 216 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 ZNF114Q8NC26 417 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 SRSF8Q9BRL6 282 aaKnown RBP8.32□□□□□ -1.08
NUP98-205ENST00000397007 COPZ2Q9P299 210 aa8.32□□□□□ -1.08
NUP98-205ENST00000397007 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
NUP98-205ENST00000397007 UPK2O00526 184 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 SFT2D2O95562 160 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 FXYD4P59646 89 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 HERV-K104P61576 105 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 OXA1LQ15070 435 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 TRBV9A0A0B4J1U6 114 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 RNF212BA8MTL3 300 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 OR9G9P0C7N8 305 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 PSMB8P28062 276 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 TAF15Q92804 592 aaKnown RBP eCLIP8.31□□□□□ -1.08
NUP98-205ENST00000397007 ABCB10Q9NRK6 738 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 FLVCR2Q9UPI3 526 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 TRAV3A0A0B4J244 114 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 TNFSF12O43508 249 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 OR2B8PP59922 312 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 PPP1R1AQ13522 171 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 PPP1R27Q86WC6 154 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 SGMS2Q8NHU3 365 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 NDUFA4L2Q9NRX3 87 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 ZNF257Q9Y2Q1 563 aa8.31□□□□□ -1.08
NUP98-205ENST00000397007 C9orf170A2RU37 121 aa8.3□□□□□ -1.08
NUP98-205ENST00000397007 SOX15O60248 233 aa8.3□□□□□ -1.08
NUP98-205ENST00000397007 PTTG1O95997 202 aa8.3□□□□□ -1.08
NUP98-205ENST00000397007 OR5AC1P0C628 307 aa8.3□□□□□ -1.08
NUP98-205ENST00000397007 PI3P19957 117 aa8.3□□□□□ -1.08
NUP98-205ENST00000397007 AWAT1Q58HT5 328 aa8.3□□□□□ -1.08
NUP98-205ENST00000397007 TRIQKQ629K1 86 aa8.3□□□□□ -1.08
NUP98-205ENST00000397007 NRARPQ7Z6K4 114 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms