RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MGST3O14880 152 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 Q71RC1 249 aaPredicted RBP13.98□□□□□ -0.17
RGP1-201ENST00000378078 OR51G1Q8NGK1 321 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 KNTC1P50748 2209 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 PSCAO43653 123 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 CELA3AP09093 270 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 SLC25A45Q8N413 288 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 C10orf126Q8N4M7 172 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 NPIPB3Q92617 1050 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 MRPS16Q9Y3D3 137 aaKnown RBP13.97□□□□□ -0.17
RGP1-201ENST00000378078 RPL35AP18077 110 aaKnown RBP13.97□□□□□ -0.17
RGP1-201ENST00000378078 CD33P20138 364 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 FXYD1O00168 92 aa13.97□□□□□ -0.17
RGP1-201ENST00000378078 PNRC1Q12796 327 aaPredicted RBP13.97□□□□□ -0.17
RGP1-201ENST00000378078 ARHGEF17Q96PE2 2063 aaPredicted RBP13.97□□□□□ -0.17
RGP1-201ENST00000378078 NANOS3P60323 173 aaKnown RBP13.97□□□□□ -0.17
RGP1-201ENST00000378078 SCARF2Q96GP6 870 aaPredicted RBP13.97□□□□□ -0.17
RGP1-201ENST00000378078 RRHO14718 337 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 GTSCR1Q86UQ5 136 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 MRPL16Q9NX20 251 aaKnown RBP13.96□□□□□ -0.17
RGP1-201ENST00000378078 JKAMPQ9P055 326 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 LYNX1G3V0Z9 82 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 OGG1O15527 345 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 PGLYRP1O75594 196 aaPredicted RBP13.96□□□□□ -0.17
RGP1-201ENST00000378078 TYMSP04818 313 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 LYNX1P0DP58 116 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 FGF12P61328 243 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 ASCL4Q6XD76 172 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 CHAC2Q8WUX2 184 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 TRAF4Q9BUZ4 470 aaPredicted RBP13.96□□□□□ -0.17
RGP1-201ENST00000378078 WDR54Q9H977 334 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 TRGC2P03986 189 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 DNAJC4Q9NNZ3 241 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 KCNK7Q9Y2U2 307 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 GCSAMQ8N6F7 178 aa13.96□□□□□ -0.17
RGP1-201ENST00000378078 TRAV24A0A0B4J272 114 aa13.96□□□□□ -0.18
RGP1-201ENST00000378078 LEPROTL1O95214 131 aa13.96□□□□□ -0.18
RGP1-201ENST00000378078 SRIP30626 198 aa13.96□□□□□ -0.18
RGP1-201ENST00000378078 RPS11P62280 158 aaKnown RBP eCLIP13.96□□□□□ -0.18
RGP1-201ENST00000378078 NXT2Q9NPJ8 142 aaKnown RBP13.96□□□□□ -0.18
RGP1-201ENST00000378078 FGFRL1Q8N441 504 aa13.96□□□□□ -0.18
RGP1-201ENST00000378078 SIGLEC12Q96PQ1 595 aa13.96□□□□□ -0.18
RGP1-201ENST00000378078 PILRBQ9UKJ0 227 aa13.96□□□□□ -0.18
RGP1-201ENST00000378078 CRPP02741 224 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 HOXA6P31267 233 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 ELOA3CA0A087WX78 387 aaPredicted RBP13.95□□□□□ -0.18
RGP1-201ENST00000378078 FOXH1O75593 365 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 CDS2O95674 445 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 RAB24Q969Q5 203 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 FBXL7Q9UJT9 491 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 ERGP11308 486 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 TSPAN7P41732 249 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 ODAMA1E959 279 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 GGCTO75223 188 aaKnown RBP13.95□□□□□ -0.18
RGP1-201ENST00000378078 APCDD1LQ8NCL9 501 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
RGP1-201ENST00000378078 CXorf65A6NEN9 183 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 GPR146Q96CH1 333 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 MMD2Q8IY49 270 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 ZCCHC24Q8N2G6 241 aaKnown RBP13.94□□□□□ -0.18
RGP1-201ENST00000378078 SEMA5BQ9P283 1151 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 APOMO95445 188 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 DMRTA1Q5VZB9 504 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 OR9G4Q8NGQ1 327 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 PRR31Q5SQ13 230 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 SELENOHQ8IZQ5 122 aaKnown RBP13.94□□□□□ -0.18
RGP1-201ENST00000378078 TEX29Q8N6K0 151 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 C10orf35Q96D05 121 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 ZNF646O15015 1829 aaPredicted RBP13.94□□□□□ -0.18
RGP1-201ENST00000378078 TIAF1O95411 115 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 RAB9AP51151 201 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 FAM74A3Q4VXF1 159 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 TMEM42Q69YG0 159 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 PPP1R27Q86WC6 154 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 DLL3Q9NYJ7 618 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 ZNF107Q9UII5 783 aaPredicted RBP13.94□□□□□ -0.18
RGP1-201ENST00000378078 H0YL77 283 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 RNF133Q8WVZ7 376 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 TMEM106BQ9NUM4 274 aa13.94□□□□□ -0.18
RGP1-201ENST00000378078 FAM209BQ5JX69 171 aa13.93□□□□□ -0.18
RGP1-201ENST00000378078 CNTFRP26992 372 aa13.93□□□□□ -0.18
RGP1-201ENST00000378078 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
RGP1-201ENST00000378078 TDGF1P3P51864 188 aa13.93□□□□□ -0.18
RGP1-201ENST00000378078 LOC390937A0A1W2PQ73 354 aa13.93□□□□□ -0.18
RGP1-201ENST00000378078 CD7P09564 240 aa13.93□□□□□ -0.18
RGP1-201ENST00000378078 APOBEC3AP31941 199 aaPredicted RBP13.93□□□□□ -0.18
RGP1-201ENST00000378078 CDK2AP2O75956 126 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 FOXA3P55318 350 aaPredicted RBP13.92□□□□□ -0.18
RGP1-201ENST00000378078 ZBTB34Q8NCN2 500 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 PPIFP30405 207 aaKnown RBP13.92□□□□□ -0.18
RGP1-201ENST00000378078 ZNF688P0C7X2 276 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 CYB5R2Q6BCY4 276 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 AHDC1Q5TGY3 1603 aaPredicted RBP13.92□□□□□ -0.18
RGP1-201ENST00000378078 CFDP00746 253 aaPredicted RBP13.92□□□□□ -0.18
RGP1-201ENST00000378078 EVI2AP22794 236 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 UBE2V2Q15819 145 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 TRGV4A0A0C4DH28 118 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 COX6A1P12074 109 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms