RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 OR2A7Q96R45 310 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 RANBP3Q9H6Z4 567 aaPredicted RBP17.64■□□□□ 0.41
HOXA4-201ENST00000360046 SHOXO15266 292 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 RAP2BP61225 183 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 OR4C13Q8NGP0 309 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 GPR146Q96CH1 333 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 AJUBAQ96IF1 538 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 HARBI1Q96MB7 349 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 SPIN2AQ99865 258 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 SPIN2BQ9BPZ2 258 aa17.63■□□□□ 0.41
HOXA4-201ENST00000360046 HRASP01112 189 aa17.62■□□□□ 0.41
HOXA4-201ENST00000360046 ARHGDIBP52566 201 aa17.62■□□□□ 0.41
HOXA4-201ENST00000360046 H2BFWTQ7Z2G1 175 aa17.62■□□□□ 0.41
HOXA4-201ENST00000360046 OR2T35Q8NGX2 323 aa17.62■□□□□ 0.41
HOXA4-201ENST00000360046 OSR1Q8TAX0 266 aaPredicted RBP17.62■□□□□ 0.41
HOXA4-201ENST00000360046 ASB13Q8WXK3 278 aa17.62■□□□□ 0.41
HOXA4-201ENST00000360046 MMP24Q9Y5R2 645 aa17.62■□□□□ 0.41
HOXA4-201ENST00000360046 SMLR1H3BR10 107 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 CD5LO43866 347 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 RPS16P62249 146 aaKnown RBP17.61■□□□□ 0.41
HOXA4-201ENST00000360046 TMEM177Q53S58 311 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 FAM219AQ8IW50 185 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 TCTE3Q8IZS6 198 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 CFHR4Q92496 578 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 RHOVQ96L33 236 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 MS4A7Q9GZW8 240 aaPredicted RBP17.61■□□□□ 0.41
HOXA4-201ENST00000360046 CYCSP99999 105 aaKnown RBP17.61■□□□□ 0.41
HOXA4-201ENST00000360046 NMES1Q9C002 83 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 YAE1D1Q9NRH1 226 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 CACNG5Q9UF02 275 aa17.61■□□□□ 0.41
HOXA4-201ENST00000360046 A0A0U1RQK1 487 aa17.6■□□□□ 0.41
HOXA4-201ENST00000360046 ATP6V1G1O75348 118 aa17.6■□□□□ 0.41
HOXA4-201ENST00000360046 CD1BP29016 333 aa17.6■□□□□ 0.41
HOXA4-201ENST00000360046 KRTAP1-1Q07627 177 aa17.6■□□□□ 0.41
HOXA4-201ENST00000360046 SRSF4Q08170 494 aaKnown RBP17.6■□□□□ 0.41
HOXA4-201ENST00000360046 LRRC37A5PQ49AS3 106 aa17.6■□□□□ 0.41
HOXA4-201ENST00000360046 TMEM140Q9NV12 185 aa17.6■□□□□ 0.41
HOXA4-201ENST00000360046 FAM96BQ9Y3D0 163 aa17.6■□□□□ 0.41
HOXA4-201ENST00000360046 VENTXO95231 258 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 SCGB1D2O95969 90 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 CD24P25063 80 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 HABP2Q14520 560 aaPredicted RBP17.59■□□□□ 0.41
HOXA4-201ENST00000360046 SMCO1Q147U7 214 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 SPNS3Q6ZMD2 512 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 OR1S1Q8NH92 325 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 NANPQ8TBE9 248 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 AIFM2Q9BRQ8 373 aa17.59■□□□□ 0.41
HOXA4-201ENST00000360046 A0A1B0GU03 582 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 SRRM4A7MD48 611 aaKnown RBP17.58■□□□□ 0.41
HOXA4-201ENST00000360046 IGKV1D-33P01593 117 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 IGKV1-33P01594 117 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 P0C879 139 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 HES1Q14469 280 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 Q6ZRM9 215 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 PPP1R1CQ8WVI7 109 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 RITA1Q96K30 269 aa17.58■□□□□ 0.41
HOXA4-201ENST00000360046 RBMXL2O75526 392 aaKnown RBP17.58■□□□□ 0.4
HOXA4-201ENST00000360046 SNRNP70P08621 437 aaKnown RBP17.58■□□□□ 0.4
HOXA4-201ENST00000360046 CD99P14209 185 aa17.58■□□□□ 0.4
HOXA4-201ENST00000360046 BRS3P32247 399 aa17.58■□□□□ 0.4
HOXA4-201ENST00000360046 OR4A47Q6IF82 309 aa17.58■□□□□ 0.4
HOXA4-201ENST00000360046 SMR3AQ99954 134 aa17.58■□□□□ 0.4
HOXA4-201ENST00000360046 NUP50Q9UKX7 468 aa17.58■□□□□ 0.4
HOXA4-201ENST00000360046 SOX21Q9Y651 276 aaPredicted RBP17.58■□□□□ 0.4
HOXA4-201ENST00000360046 NXPH3O95157 252 aa17.57■□□□□ 0.4
HOXA4-201ENST00000360046 SAA1P0DJI8 122 aaPredicted RBP17.57■□□□□ 0.4
HOXA4-201ENST00000360046 SLC25A6P12236 298 aa17.57■□□□□ 0.4
HOXA4-201ENST00000360046 S100A10P60903 97 aa17.57■□□□□ 0.4
HOXA4-201ENST00000360046 HNF4GQ14541 408 aa17.57■□□□□ 0.4
HOXA4-201ENST00000360046 FOXRED2Q8IWF2 684 aa17.57■□□□□ 0.4
HOXA4-201ENST00000360046 NSG2Q9Y328 171 aa17.57■□□□□ 0.4
HOXA4-201ENST00000360046 MOSP00540 346 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 OR9G9P0C7N8 305 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 LGALS7P47929 136 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 POU2AF1Q16633 256 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 ZFP69Q49AA0 526 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 Q5BKY6 102 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 OR4D5Q8NGN0 318 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 MXRA5Q9NR99 2828 aa17.56■□□□□ 0.4
HOXA4-201ENST00000360046 FBP1P09467 338 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 BPIFB3P59826 476 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 OR2B8PP59922 312 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 VMA21Q3ZAQ7 101 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 OR2T10Q8NGZ9 312 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 OR4A16Q8NH70 328 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 SLC25A17O43808 307 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 FSHBP01225 129 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 IGLV2-23P01705 113 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 CNTFRP26992 372 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 PSMB6P28072 239 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 FGL1Q08830 312 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 IL15RAQ13261 267 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 RAB32Q13637 225 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 IL17RELQ6ZVW7 336 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 EAF1Q96JC9 268 aaPredicted RBP17.55■□□□□ 0.4
HOXA4-201ENST00000360046 TSNAXQ99598 290 aaKnown RBP17.55■□□□□ 0.4
HOXA4-201ENST00000360046 TMUB1Q9BVT8 246 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.55■□□□□ 0.4
HOXA4-201ENST00000360046 COA4Q9NYJ1 87 aa17.55■□□□□ 0.4
HOXA4-201ENST00000360046 LSM5Q9Y4Y9 91 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms