RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MS4A5Q9H3V2 200 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 CALYQ9NYX4 217 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 ABCA1O95477 2261 aa13.3□□□□□ -0.28
TRAPPC11-202ENST00000357207 WNK2Q9Y3S1 2297 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 LNP1A1A4G5 178 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 M0QZ24 198 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 DEFB124Q8NES8 71 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 NABP2Q9BQ15 211 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 GAGE10A6NGK3 116 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 FOLR2P14207 255 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 P2RY6Q15077 328 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 FLVCR1-AS1Q8TAF5 88 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 OR5P3Q8WZ94 311 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 TRBV6-7A0A0A0MS04 114 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 CTAG1AP78358 180 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 VWCEQ96DN2 955 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 NPCDR1Q9BY65 106 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 FAM117AQ9C073 453 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZNF430Q9H8G1 570 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 CHCHD2Q9Y6H1 151 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 ICAM4Q14773 271 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 DNASE2BQ8WZ79 361 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 GRAMD2BQ96HH9 432 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 SCNM1Q9BWG6 230 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 RTN4RQ9BZR6 473 aa13.29□□□□□ -0.28
TRAPPC11-202ENST00000357207 CA2P00918 260 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 RPL7P18124 248 aaKnown RBP13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 NMUP48645 174 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 KLF14Q8TD94 323 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 WDYHV1Q96HA8 205 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 PARD6GQ9BYG4 376 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 JPT1Q9UK76 154 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 PPIAL4EA0A075B759 164 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 PPIAL4DF5H284 164 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BKO60814 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BJP06899 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 CD3EP07766 207 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 PPIAL4FP0DN26 164 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BOP23527 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 CD40P25942 277 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BBP33778 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 MAS1LP35410 378 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 RND2P52198 227 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BDP58876 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BCP62807 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST2H2BEQ16778 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZNF525Q8N782 197 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 ITLN1Q8WWA0 313 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BHQ93079 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BNQ99877 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 HIST1H2BMQ99879 126 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 PPIAL4AQ9Y536 164 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 LOC389332A0A1B0GUA5 103 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 FBLL1A6NHQ2 334 aaKnown RBP13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 DLL1O00548 723 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 RNF224P0DH78 156 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 PCP4P48539 62 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 MMDQ15546 238 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZNF319Q9P2F9 582 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 NCOR1O75376 2440 aa13.28□□□□□ -0.28
TRAPPC11-202ENST00000357207 C5orf52A6NGY3 159 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 ATOH7Q8N100 152 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 ZNF837Q96EG3 531 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 C19orf24Q9BVV8 132 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 TNFRSF19Q9NS68 423 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 MC5RP33032 325 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 CENPWQ5EE01 88 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 STPG3Q8N7X2 389 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 OR10S1Q8NGN2 331 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 GATAD1Q8WUU5 269 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 C1RLQ9NZP8 487 aa13.27□□□□□ -0.28
TRAPPC11-202ENST00000357207 DPRXA6NFQ7 191 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 CA7P43166 264 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 LGALS7P47929 136 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 HCP5Q6MZN7 132 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 VKORC1L1Q8N0U8 176 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 SAP25Q8TEE9 199 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 CYTL1Q9NRR1 136 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 COA4Q9NYJ1 87 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 POLEQ07864 2286 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 LOC285556D6RIA3 1793 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 GOSR1O95249 250 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 CCL20P78556 96 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 HOXA4Q00056 320 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 SRSF9Q13242 221 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 HEPN1Q6WQI6 88 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 OR8B3Q8NGG8 313 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 MYOZ3Q8TDC0 251 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 C18orf12Q96KH6 178 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 ZNF714Q96N38 554 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 TMUB1Q9BVT8 246 aa13.27□□□□□ -0.29
TRAPPC11-202ENST00000357207 RRHO14718 337 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 RPL23P62829 140 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms