RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 KIR3DL3Q8N743 410 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 MRPL20Q9BYC9 149 aaKnown RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 TMEM242Q9NWH2 141 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 IGKV6D-41A0A0C4DH26 115 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 SCRG1O75711 98 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 SUMO3P55854 103 aaPredicted RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 TGIF1Q15583 401 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 DCAF12L2Q5VW00 463 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 LHX8Q68G74 356 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 ADAMTSL5Q6ZMM2 481 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 SIGLEC7Q9Y286 467 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 PRSS21Q9Y6M0 314 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 NAV2Q8IVL1 2488 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 COL1A1P02452 1464 aaPredicted RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 NRXN2Q9P2S2 1712 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 ANOS1P23352 680 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 LEPP41159 167 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 LHX2P50458 406 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 IFITM2Q01629 132 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 OR1L8Q8NGR8 309 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 LRRC61Q9BV99 259 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 MRPL32Q9BYC8 188 aaKnown RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 COL2A1P02458 1487 aaPredicted RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 TRBV20OR9-2A0A075B6H5 130 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 FAM90A26D6RGX4 464 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 LINC01387J3KSC0 135 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 H2BFSP57053 126 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 COL10A1Q03692 680 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 C1orf194Q5T5A4 169 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 GJD4Q96KN9 370 aaPredicted RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 GPR35Q9HC97 309 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 EPPINO95925 133 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 NGFP01138 241 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 TFPI2P48307 235 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 THSD4Q6ZMP0 1018 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 OR4A5Q8NH83 315 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 TNS1Q9HBL0 1735 aaKnown RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 A0A096LPE4 126 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 A0A1B0GTH9 108 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 A0A1W2PPZ6 126 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 FCN3O75636 299 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 FAM157BP0CG42 384 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 AZU1P20160 251 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 FOXL2P58012 376 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 PSG6Q00889 435 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 RNPS1Q15287 305 aaKnown RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 SPRED2Q7Z698 418 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 MDP1Q86V88 176 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 FAM19A2Q8N3H0 131 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 DRAM1Q8N682 238 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 ZNF114Q8NC26 417 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 TMEM170AQ8WVE7 144 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 WNT2BQ93097 391 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 C18orf15Q96N68 181 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 GGTLC1Q9BX51 225 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 MS4A5Q9H3V2 200 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 TMEM56-RWDD3S4R434 201 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 OGG1O15527 345 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 CTSVO60911 334 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 C1QL1O75973 258 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 OR9G9P0C7N8 305 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 C1QTNF9P0C862 333 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 ASCL5Q7RTU5 278 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 A0A087WUJ7 227 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 FRG2CA6NGY1 282 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 DHHO43323 396 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 SPEM2Q0P670 501 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 STPG3Q8N7X2 389 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 OR4C3Q8NH37 302 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 SCGB3A1Q96QR1 104 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 SCNM1Q9BWG6 230 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 INSM1Q01101 510 aaPredicted RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 CDKN3Q16667 212 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 TMEM190Q8WZ59 177 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 MRGPRX3Q96LB0 322 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 RNF39Q9H2S5 420 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 IL36BQ9NZH7 164 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 A0A1B0GWJ7 208 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 CEACAM18A8MTB9 384 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 SNAI2O43623 268 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 SYNGR1O43759 233 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 DUTP33316 252 aaKnown RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 SIGLEC14Q08ET2 396 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 H3BMM0 161 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 GPR6P46095 362 aaPredicted RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 FXYD3Q14802 87 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 KIR3DS1Q14943 382 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 UBE2WQ96B02 151 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 PRSS27Q9BQR3 290 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 APOHP02749 345 aaPredicted RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 C1orf220Q5T0J3 134 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 MRPL24Q96A35 216 aaKnown RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 ALKBH3Q96Q83 286 aaPredicted RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 KCNE3Q9Y6H6 103 aa5.36□□□□□ -1.55
VCAN-203ENST00000343200 FN1P02751 2386 aaKnown RBP5.36□□□□□ -1.55
VCAN-203ENST00000343200 H0YIG0 161 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 SYNGR3O43761 229 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 OR2A4O95047 310 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 NPPBP16860 134 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms