RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 FAM90A23PA8MXZ1 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A15PP0C7V4 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A13PP0C7W8 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A14PP0C7W9 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A24PP0C7X0 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FOLR2P14207 255 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 SSX7Q7RTT5 188 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 SLC17A3O00476 420 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 PSG5Q15238 335 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM122AQ96E09 287 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FRYQ5TBA9 3013 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 LRRC30A6NM36 301 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 PLAUP00749 431 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 IGLV3-1P01715 115 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 C1QTNF9P0C862 333 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 ARL14EPLP0DKL9 152 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 GFRA1P56159 465 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FXYD3Q14802 87 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 DBX2Q6ZNG2 339 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 TPPP3Q9BW30 176 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 SPG11Q96JI7 2443 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 GATA2P23769 480 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 PRDX2P32119 198 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 PCSK4Q6UW60 755 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 ABHD5Q8WTS1 349 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 SELLP14151 372 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 DPPA3Q6W0C5 159 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 NGBQ9NPG2 151 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 PXMP4Q9Y6I8 212 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 KBTBD11O94819 623 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 ZNF645Q8N7E2 425 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 PARD6AQ9NPB6 346 aa13.61□□□□□ -0.23
PDZRN3-201ENST00000263666 HRASP01112 189 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 CBLN1P23435 193 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 TNFSF4P23510 183 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 OR10G8Q8NGN5 311 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 FKBP11Q9NYL4 201 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 SRSF6Q13247 344 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 TIGITQ495A1 244 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 VN1R17PQ8TDU5 208 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 TXN2Q99757 166 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 SMPD2O60906 423 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 PKIAP61925 76 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 PLGLAQ15195 96 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 FOXL2NBQ6ZUU3 175 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 NPCDR1Q9BY65 106 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 CLCF1Q9UBD9 225 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 IL18BPO95998 194 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 GNB1P62873 340 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A2PQ658T7 463 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 HIST3H2BBQ8N257 126 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 RBMXL3Q8N7X1 1067 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 HIST1H2BLQ99880 126 aa13.6□□□□□ -0.23
PDZRN3-201ENST00000263666 IFNL4K9M1U5 179 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 SAXO1Q8IYX7 474 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 CAMPP49913 170 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 CTDSP1Q9GZU7 261 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 PLXNB1O43157 2135 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 CNN1P51911 297 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 CCL8P80075 99 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 MRPS11P82912 194 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 ZNF726P1Q15940 193 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 TBX15Q96SF7 602 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 PKIBQ9C010 78 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 COMMD5Q9GZQ3 224 aa13.59□□□□□ -0.23
PDZRN3-201ENST00000263666 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.23
PDZRN3-201ENST00000263666 SNURFLB1AK76 121 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 TMPRSS2O15393 492 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 CRISP2P16562 243 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 IQCJQ1A5X6 159 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 CMTM2Q8TAZ6 248 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 BLNKQ8WV28 456 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 LSM10Q969L4 123 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 TGOLN2O43493 480 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF585BQ52M93 769 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF439Q8NDP4 499 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 MANBALQ9NQG1 85 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF729A6NN14 1252 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 IGHV1-2P23083 117 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 SUMO1P63165 101 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 FAM214BQ7L5A3 538 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 SIGLECL1Q8N7X8 197 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 OR2V2Q96R30 315 aa13.58□□□□□ -0.24
PDZRN3-201ENST00000263666 DLL1O00548 723 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 IGKV1D-33P01593 117 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 IGKV1-33P01594 117 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 MYOD1P15172 320 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 PAX6P26367 422 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 OR5I1Q13606 314 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 ATP6V1FQ16864 119 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 SCNM1Q9BWG6 230 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 FAM157AC9JC47 383 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 DKK1O94907 266 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 ASCL4Q6XD76 172 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms