RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CCL1P22362 96 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 DDB2Q92466 427 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 DOPEY2Q9Y3R5 2298 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 LYNX1G3V0Z9 82 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 LYNX1P0DP58 116 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 RAX2Q96IS3 184 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 TSTD3H0UI37 97 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 J3KRW8 73 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 FOXG1P55316 489 aaPredicted RBP11.74□□□□□ -0.53
CDH1-201ENST00000261769 B3GALT5-AS1P59052 145 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 TNFRSF9Q07011 255 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 TMEM133Q9H2Q1 129 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 VAX2Q9UIW0 290 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 FAM208BQ5VWN6 2430 aa11.74□□□□□ -0.53
CDH1-201ENST00000261769 RBFOX3A6NFN3 312 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 CLDN34H7C241 214 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 P01737 135 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 SLC25A16P16260 332 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 CRYGSP22914 178 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
CDH1-201ENST00000261769 FAM169BQ8N8A8 192 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 NPDC1Q9NQX5 325 aaPredicted RBP11.73□□□□□ -0.53
CDH1-201ENST00000261769 OR2J3O76001 311 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 SFTA3P0C7M3 94 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 FBXL15Q9H469 300 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 PDE6DO43924 150 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 HSBP1O75506 76 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 WNT5AP41221 380 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 P2RY4P51582 365 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 RPL39P5Q59GN2 51 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 ZNF362Q5T0B9 420 aaPredicted RBP11.73□□□□□ -0.53
CDH1-201ENST00000261769 ARTNQ5T4W7 220 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 RGP1Q92546 391 aaPredicted RBP11.73□□□□□ -0.53
CDH1-201ENST00000261769 ZNF586Q9NXT0 402 aa11.73□□□□□ -0.53
CDH1-201ENST00000261769 SNRNP200O75643 2136 aaKnown RBP11.73□□□□□ -0.53
CDH1-201ENST00000261769 C7orf66A4D0T2 115 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 PROB1E7EW31 1015 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 SIGLEC5O15389 551 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 ZNF818PQ6ZRF7 136 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 ZNF738Q8NE65 137 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 PNRC1Q12796 327 aaPredicted RBP11.72□□□□□ -0.53
CDH1-201ENST00000261769 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 PPP1R27Q86WC6 154 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 GTF3AQ92664 365 aaKnown RBP11.72□□□□□ -0.53
CDH1-201ENST00000261769 TNFSF18Q9UNG2 199 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 YTHDF2Q9Y5A9 579 aaKnown RBP11.72□□□□□ -0.53
CDH1-201ENST00000261769 PCNX1Q96RV3 2341 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 CD74P04233 296 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 ACAA1P09110 424 aaPredicted RBP11.72□□□□□ -0.53
CDH1-201ENST00000261769 CCL3L1P16619 93 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 CXCL3P19876 107 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
CDH1-201ENST00000261769 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 HELTA6NFD8 242 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 ATP6V0CP27449 155 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 ZNF137PP52743 207 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 SIGLECL1Q8N7X8 197 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 PIEZO1Q92508 2521 aa11.72□□□□□ -0.53
CDH1-201ENST00000261769 SLC16A13Q7RTY0 426 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 FGFBP3Q8TAT2 258 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 TMEM204Q9BSN7 226 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 SLC2A8Q9NY64 477 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 FCGR2BP31994 310 aaPredicted RBP11.71□□□□□ -0.53
CDH1-201ENST00000261769 RRN3P1Q2M238 152 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 COX19Q49B96 90 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 NCMAPQ5T1S8 102 aa11.71□□□□□ -0.53
CDH1-201ENST00000261769 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.54
CDH1-201ENST00000261769 MELTFP08582 738 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 TSPOP30536 169 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 KIF26BQ2KJY2 2108 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 SRRM5B3KS81 715 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.54
CDH1-201ENST00000261769 RIGQ13278 110 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 LAIR2Q6ISS4 152 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 NABP1Q96AH0 204 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 NAT8Q9UHE5 227 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 NAT8BQ9UHF3 227 aa11.71□□□□□ -0.54
CDH1-201ENST00000261769 YPEL1O60688 119 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 ZNF345Q14585 488 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 PRR30Q53SZ7 412 aaPredicted RBP11.7□□□□□ -0.54
CDH1-201ENST00000261769 ZNF474Q6S9Z5 364 aaPredicted RBP11.7□□□□□ -0.54
CDH1-201ENST00000261769 COLCA1Q6ZS62 124 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 ARPC1AQ92747 370 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 NOL4LQ96MY1 436 aaPredicted RBP11.7□□□□□ -0.54
CDH1-201ENST00000261769 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 USF3Q68DE3 2245 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 VSIG10L2P0DP72 767 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 BSXQ3C1V8 233 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 PAGE4O60829 102 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 WDR73Q6P4I2 378 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 IGF2-ASQ6U949 168 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms