RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W AZR1P50080 613 aa1.98□□□□□ -2.09
CTF4YPR135W YGL081WP53156 320 aa1.98□□□□□ -2.09
CTF4YPR135W TYW3P53177 273 aa1.98□□□□□ -2.09
CTF4YPR135W OPI10Q08202 246 aa1.98□□□□□ -2.09
CTF4YPR135W YOR378WQ08902 515 aa1.98□□□□□ -2.09
CTF4YPR135W YLL058WQ12198 575 aa1.98□□□□□ -2.09
CTF4YPR135W OSH2Q12451 1283 aa1.98□□□□□ -2.09
CTF4YPR135W FMP27Q06179 2628 aa1.97□□□□□ -2.09
CTF4YPR135W YLR422WQ06409 1932 aa1.97□□□□□ -2.09
CTF4YPR135W RPL8AP17076 256 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W STE14P32584 239 aa1.97□□□□□ -2.09
CTF4YPR135W UTR4P32626 227 aa1.97□□□□□ -2.09
CTF4YPR135W YKL097CP34245 136 aa1.97□□□□□ -2.09
CTF4YPR135W YKL107WP34251 309 aa1.97□□□□□ -2.09
CTF4YPR135W GRX7P38068 203 aa1.97□□□□□ -2.09
CTF4YPR135W RSP5P39940 809 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W TIM54P47045 478 aa1.97□□□□□ -2.09
CTF4YPR135W MMR1Q06324 491 aa1.97□□□□□ -2.09
CTF4YPR135W SPO75Q07798 868 aa1.97□□□□□ -2.09
CTF4YPR135W YAP7Q08182 245 aa1.97□□□□□ -2.09
CTF4YPR135W FLC1Q08967 793 aa1.97□□□□□ -2.09
CTF4YPR135W NOP14Q99207 810 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W KAR1P11927 433 aa1.97□□□□□ -2.09
CTF4YPR135W SNA3P14359 133 aa1.97□□□□□ -2.09
CTF4YPR135W MSD1P15179 658 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W TRX2P22803 104 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W RPT3P33298 428 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W MRP8P35719 219 aa1.97□□□□□ -2.09
CTF4YPR135W VPS24P36095 224 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W TDP1P38319 544 aa1.97□□□□□ -2.09
CTF4YPR135W MPP10P47083 593 aaKnown RBP1.97□□□□□ -2.09
CTF4YPR135W TGL2P54857 326 aa1.97□□□□□ -2.09
CTF4YPR135W EEB1Q02891 456 aa1.97□□□□□ -2.09
CTF4YPR135W PEX19Q07418 342 aa1.97□□□□□ -2.09
CTF4YPR135W RKM4Q12504 494 aa1.97□□□□□ -2.09
CTF4YPR135W KRS1P15180 591 aaKnown RBP1.96□□□□□ -2.1
CTF4YPR135W CST26P38226 397 aa1.96□□□□□ -2.1
CTF4YPR135W IES5P40060 125 aa1.96□□□□□ -2.1
CTF4YPR135W FAF1P40546 346 aaPredicted RBP1.96□□□□□ -2.1
CTF4YPR135W PFD1P46988 109 aa1.96□□□□□ -2.1
CTF4YPR135W MAL11P53048 616 aa1.96□□□□□ -2.1
CTF4YPR135W GPG1P53130 126 aa1.96□□□□□ -2.1
CTF4YPR135W IMO32P53219 342 aa1.96□□□□□ -2.1
CTF4YPR135W ERG5P54781 538 aa1.96□□□□□ -2.1
CTF4YPR135W PNG1Q02890 363 aa1.96□□□□□ -2.1
CTF4YPR135W ESC2Q06340 456 aa1.96□□□□□ -2.1
CTF4YPR135W YDL124WQ07551 312 aaKnown RBP1.96□□□□□ -2.1
CTF4YPR135W ISA1Q07821 250 aaPredicted RBP1.96□□□□□ -2.1
CTF4YPR135W NTG2Q08214 380 aa1.96□□□□□ -2.1
CTF4YPR135W FRE5Q08908 694 aa1.96□□□□□ -2.1
CTF4YPR135W YLR125WQ12138 136 aa1.96□□□□□ -2.1
CTF4YPR135W PWP2P25635 923 aaKnown RBP1.96□□□□□ -2.1
CTF4YPR135W FUB1P25659 250 aa1.96□□□□□ -2.1
CTF4YPR135W THI4P32318 326 aa1.96□□□□□ -2.1
CTF4YPR135W RIX1P38883 763 aaPredicted RBP1.96□□□□□ -2.1
CTF4YPR135W YNL050CP53952 270 aa1.96□□□□□ -2.1
CTF4YPR135W SSL1Q04673 461 aaPredicted RBP1.96□□□□□ -2.1
CTF4YPR135W RRD2Q12461 358 aa1.96□□□□□ -2.1
CTF4YPR135W TRM11Q12463 433 aa1.96□□□□□ -2.1
CTF4YPR135W PRP9P19736 530 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W DBP7P36120 742 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W YBR184WP38299 523 aa1.95□□□□□ -2.1
CTF4YPR135W GGA2P38817 585 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W ERP2P39704 215 aa1.95□□□□□ -2.1
CTF4YPR135W FUN12P39730 1002 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W MOB1P40484 314 aa1.95□□□□□ -2.1
CTF4YPR135W RTA1P53047 317 aa1.95□□□□□ -2.1
CTF4YPR135W YGL039WP53183 348 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W HDA1P53973 706 aa1.95□□□□□ -2.1
CTF4YPR135W SLD5Q03406 294 aa1.95□□□□□ -2.1
CTF4YPR135W UTP14Q04500 899 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W HOF1Q05080 669 aa1.95□□□□□ -2.1
CTF4YPR135W YPR196WQ06595 470 aa1.95□□□□□ -2.1
CTF4YPR135W TMA17Q12513 150 aa1.95□□□□□ -2.1
CTF4YPR135W MEX67Q99257 599 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W ACC1Q00955 2233 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W MRC1P25588 1096 aa1.95□□□□□ -2.1
CTF4YPR135W SBA1P28707 216 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W MCM4P30665 933 aaKnown RBP1.95□□□□□ -2.1
CTF4YPR135W PIN4P34217 668 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
CTF4YPR135W TY4A-JP47023 414 aa1.95□□□□□ -2.1
CTF4YPR135W ICT1Q12385 394 aa1.95□□□□□ -2.1
CTF4YPR135W ERP3Q12403 225 aa1.95□□□□□ -2.1
CTF4YPR135W NKP1Q12493 238 aa1.95□□□□□ -2.1
CTF4YPR135W CIT1P00890 479 aa1.94□□□□□ -2.1
CTF4YPR135W SEC21P32074 935 aaKnown RBP1.94□□□□□ -2.1
CTF4YPR135W NFU1P32860 256 aa1.94□□□□□ -2.1
CTF4YPR135W PTK1P36002 662 aaPredicted RBP1.94□□□□□ -2.1
CTF4YPR135W BET3P36149 193 aa1.94□□□□□ -2.1
CTF4YPR135W SLX1P38324 304 aa1.94□□□□□ -2.1
CTF4YPR135W YHL017WP38745 532 aa1.94□□□□□ -2.1
CTF4YPR135W ZAP1P47043 880 aa1.94□□□□□ -2.1
CTF4YPR135W RAI1P53063 387 aaKnown RBP1.94□□□□□ -2.1
CTF4YPR135W PAP2P53632 584 aaKnown RBP1.94□□□□□ -2.1
CTF4YPR135W GIR2Q03768 265 aaPredicted RBP1.94□□□□□ -2.1
CTF4YPR135W SND1Q04007 877 aa1.94□□□□□ -2.1
CTF4YPR135W TMA64Q04600 565 aaKnown RBP1.94□□□□□ -2.1
CTF4YPR135W YMR321CQ04898 105 aa1.94□□□□□ -2.1
CTF4YPR135W COG4Q06096 861 aa1.94□□□□□ -2.1
CTF4YPR135W SLX4Q12098 748 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms