RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C VPH1P32563 840 aaKnown RBP1.99□□□□□ -2.09
SFB2YNL049C SRP101P32916 621 aa1.99□□□□□ -2.09
SFB2YNL049C STE13P33894 931 aa1.99□□□□□ -2.09
SFB2YNL049C RFC5P38251 354 aa1.99□□□□□ -2.09
SFB2YNL049C GZF3P42944 551 aaKnown RBP1.99□□□□□ -2.09
SFB2YNL049C RRP46P53256 223 aaPredicted RBP1.99□□□□□ -2.09
SFB2YNL049C ECM9Q02202 377 aa1.99□□□□□ -2.09
SFB2YNL049C SSY1Q03770 852 aa1.99□□□□□ -2.09
SFB2YNL049C SDH5Q08230 162 aa1.99□□□□□ -2.09
SFB2YNL049C MCA1Q08601 432 aa1.99□□□□□ -2.09
SFB2YNL049C HFI1Q12060 488 aa1.99□□□□□ -2.09
SFB2YNL049C Q0142Q9ZZW4 58 aa1.99□□□□□ -2.09
SFB2YNL049C DIF1O13577 133 aa1.99□□□□□ -2.09
SFB2YNL049C SPS1P08458 490 aa1.99□□□□□ -2.09
SFB2YNL049C HMG2P12684 1045 aa1.99□□□□□ -2.09
SFB2YNL049C HIR1P32479 840 aa1.99□□□□□ -2.09
SFB2YNL049C SWE1P32944 819 aa1.99□□□□□ -2.09
SFB2YNL049C YKR051WP36142 418 aa1.99□□□□□ -2.09
SFB2YNL049C TAT1P38085 619 aa1.99□□□□□ -2.09
SFB2YNL049C RFC1P38630 861 aaKnown RBP1.99□□□□□ -2.09
SFB2YNL049C DOT6P40059 670 aaKnown RBP1.99□□□□□ -2.09
SFB2YNL049C GPP2P40106 250 aaKnown RBP1.99□□□□□ -2.09
SFB2YNL049C OPT1P40897 799 aa1.99□□□□□ -2.09
SFB2YNL049C DUG1P43616 481 aaKnown RBP1.99□□□□□ -2.09
SFB2YNL049C NIT2P47016 307 aa1.99□□□□□ -2.09
SFB2YNL049C YGR153WP48238 217 aa1.99□□□□□ -2.09
SFB2YNL049C YKR011CQ02209 353 aa1.99□□□□□ -2.09
SFB2YNL049C VPS64Q03944 604 aa1.99□□□□□ -2.09
SFB2YNL049C SSL1Q04673 461 aaPredicted RBP1.99□□□□□ -2.09
SFB2YNL049C CRR1Q05790 422 aa1.99□□□□□ -2.09
SFB2YNL049C VIP1Q06685 1146 aaKnown RBP1.99□□□□□ -2.09
SFB2YNL049C YOR022CQ12204 715 aa1.99□□□□□ -2.09
SFB2YNL049C YLR122CQ12312 125 aa1.99□□□□□ -2.09
SFB2YNL049C ERP3Q12403 225 aa1.99□□□□□ -2.09
SFB2YNL049C RPS21AP0C0V8 87 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C YUR1P26725 428 aa1.98□□□□□ -2.09
SFB2YNL049C URK1P27515 501 aa1.98□□□□□ -2.09
SFB2YNL049C COQ2P32378 372 aa1.98□□□□□ -2.09
SFB2YNL049C MCR1P36060 302 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C DBP7P36120 742 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C HSL7P38274 827 aa1.98□□□□□ -2.09
SFB2YNL049C SET5P38890 526 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C RTS1P38903 757 aa1.98□□□□□ -2.09
SFB2YNL049C CCT5P40413 562 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C MOB1P40484 314 aa1.98□□□□□ -2.09
SFB2YNL049C MNN11P46985 422 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C DAS1P47005 663 aa1.98□□□□□ -2.09
SFB2YNL049C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SFB2YNL049C RAI1P53063 387 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C LIF1P53150 421 aa1.98□□□□□ -2.09
SFB2YNL049C LEE1Q02799 301 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C MSC2Q03455 724 aa1.98□□□□□ -2.09
SFB2YNL049C CDA1Q06702 301 aa1.98□□□□□ -2.09
SFB2YNL049C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SFB2YNL049C HAL9Q12180 1030 aa1.98□□□□□ -2.09
SFB2YNL049C YLR149CQ99296 730 aa1.98□□□□□ -2.09
SFB2YNL049C RAD61Q99359 647 aa1.98□□□□□ -2.09
SFB2YNL049C RAD50P12753 1312 aa1.98□□□□□ -2.09
SFB2YNL049C PRC1P00729 532 aa1.98□□□□□ -2.09
SFB2YNL049C ATP1P07251 545 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C SST2P11972 698 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C CHS2P14180 963 aa1.98□□□□□ -2.09
SFB2YNL049C MSB1P21339 1137 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C AEP2P22136 580 aa1.98□□□□□ -2.09
SFB2YNL049C TYE7P33122 291 aaPredicted RBP1.98□□□□□ -2.09
SFB2YNL049C PTK1P36002 662 aaPredicted RBP1.98□□□□□ -2.09
SFB2YNL049C SAP190P36123 1033 aa1.98□□□□□ -2.09
SFB2YNL049C TDA3P38758 523 aa1.98□□□□□ -2.09
SFB2YNL049C HXT6P39003 570 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C HXT7P39004 570 aa1.98□□□□□ -2.09
SFB2YNL049C IRC24P40580 263 aa1.98□□□□□ -2.09
SFB2YNL049C SHR5P41912 237 aa1.98□□□□□ -2.09
SFB2YNL049C RET2P43621 546 aa1.98□□□□□ -2.09
SFB2YNL049C ENP2P48234 707 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C NPY1P53164 384 aa1.98□□□□□ -2.09
SFB2YNL049C BRE5P53741 515 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C PTA1Q01329 785 aaPredicted RBP1.98□□□□□ -2.09
SFB2YNL049C SIZ1Q04195 904 aa1.98□□□□□ -2.09
SFB2YNL049C YLR455WQ06188 304 aa1.98□□□□□ -2.09
SFB2YNL049C NSE1Q07913 336 aa1.98□□□□□ -2.09
SFB2YNL049C THI21Q08975 551 aa1.98□□□□□ -2.09
SFB2YNL049C RPS21BQ3E754 87 aaKnown RBP1.98□□□□□ -2.09
SFB2YNL049C HOM2P13663 365 aaKnown RBP1.97□□□□□ -2.09
SFB2YNL049C UTR4P32626 227 aa1.97□□□□□ -2.09
SFB2YNL049C MNN4P36044 1178 aa1.97□□□□□ -2.09
SFB2YNL049C FUI1P38196 639 aa1.97□□□□□ -2.09
SFB2YNL049C APN2P38207 520 aa1.97□□□□□ -2.09
SFB2YNL049C YIL108WP40483 696 aaKnown RBP1.97□□□□□ -2.09
SFB2YNL049C YFL052WP43551 465 aa1.97□□□□□ -2.09
SFB2YNL049C AZR1P50080 613 aa1.97□□□□□ -2.09
SFB2YNL049C YGR012WP53206 393 aa1.97□□□□□ -2.09
SFB2YNL049C DUS4Q06063 367 aa1.97□□□□□ -2.09
SFB2YNL049C RPN7Q06103 429 aaKnown RBP1.97□□□□□ -2.09
SFB2YNL049C LPX1Q12405 387 aaKnown RBP1.97□□□□□ -2.09
SFB2YNL049C ATP4P05626 244 aa1.97□□□□□ -2.09
SFB2YNL049C HSF1P10961 833 aa1.97□□□□□ -2.09
SFB2YNL049C KIN2P13186 1147 aaKnown RBP1.97□□□□□ -2.09
SFB2YNL049C ENA1P13587 1091 aa1.97□□□□□ -2.09
SFB2YNL049C OPI1P21957 404 aa1.97□□□□□ -2.09
SFB2YNL049C TKL1P23254 680 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 109 ms