RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W CSM3Q04659 317 aa3.99□□□□□ -1.77
ECM16YMR128W GYP1Q08484 637 aa3.99□□□□□ -1.77
ECM16YMR128W THS1P04801 734 aaKnown RBP3.98□□□□□ -1.77
ECM16YMR128W CMD1P06787 147 aaKnown RBP3.98□□□□□ -1.77
ECM16YMR128W RET1P22276 1149 aaKnown RBP3.98□□□□□ -1.77
ECM16YMR128W SEC66P33754 206 aa3.98□□□□□ -1.77
ECM16YMR128W BLI1P35727 113 aa3.98□□□□□ -1.77
ECM16YMR128W HSM3P38348 480 aa3.98□□□□□ -1.77
ECM16YMR128W RAD55P38953 406 aa3.98□□□□□ -1.77
ECM16YMR128W GVP36P40531 326 aaKnown RBP3.98□□□□□ -1.77
ECM16YMR128W MCM6P53091 1017 aaKnown RBP3.98□□□□□ -1.77
ECM16YMR128W ADI1Q03677 179 aa3.98□□□□□ -1.77
ECM16YMR128W DAL4Q04895 635 aa3.98□□□□□ -1.77
ECM16YMR128W DON1Q05610 365 aa3.98□□□□□ -1.77
ECM16YMR128W DUS4Q06063 367 aa3.98□□□□□ -1.77
ECM16YMR128W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
ECM16YMR128W ERR1P0CX10 437 aa3.98□□□□□ -1.77
ECM16YMR128W ERR2P0CX11 437 aa3.98□□□□□ -1.77
ECM16YMR128W ADY2P25613 283 aa3.98□□□□□ -1.77
ECM16YMR128W CBF5P33322 483 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
ECM16YMR128W BET3P36149 193 aa3.98□□□□□ -1.77
ECM16YMR128W GIP1P38229 639 aa3.98□□□□□ -1.77
ECM16YMR128W SUL1P38359 859 aa3.98□□□□□ -1.77
ECM16YMR128W USE1P53146 245 aa3.98□□□□□ -1.77
ECM16YMR128W NOP15P53927 220 aaPredicted RBP3.98□□□□□ -1.77
ECM16YMR128W YCS4Q06156 1176 aa3.98□□□□□ -1.77
ECM16YMR128W OPI10Q08202 246 aa3.98□□□□□ -1.77
ECM16YMR128W IDI1P15496 288 aa3.98□□□□□ -1.77
ECM16YMR128W SRM1P21827 482 aa3.98□□□□□ -1.77
ECM16YMR128W AFT1P22149 690 aa3.98□□□□□ -1.77
ECM16YMR128W NPR1P22211 790 aa3.98□□□□□ -1.77
ECM16YMR128W KAP122P32767 1081 aa3.98□□□□□ -1.77
ECM16YMR128W MGE1P38523 228 aa3.98□□□□□ -1.77
ECM16YMR128W DRN1P53255 507 aaKnown RBP3.98□□□□□ -1.77
ECM16YMR128W PXR1P53335 271 aaPredicted RBP3.98□□□□□ -1.77
ECM16YMR128W IST1P53843 298 aaPredicted RBP3.98□□□□□ -1.77
ECM16YMR128W UBP2Q01476 1272 aa3.98□□□□□ -1.77
ECM16YMR128W CIR2Q08822 631 aa3.98□□□□□ -1.77
ECM16YMR128W CDC53Q12018 815 aaKnown RBP3.98□□□□□ -1.77
ECM16YMR128W YBL055CP34220 418 aaPredicted RBP3.97□□□□□ -1.77
ECM16YMR128W MTG1Q03151 367 aaPredicted RBP3.97□□□□□ -1.77
ECM16YMR128W SND1Q04007 877 aa3.97□□□□□ -1.77
ECM16YMR128W NOC3Q07896 663 aaPredicted RBP3.97□□□□□ -1.77
ECM16YMR128W ABP140Q08641 628 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W PRE8P23639 250 aa3.97□□□□□ -1.77
ECM16YMR128W MGT1P26188 188 aa3.97□□□□□ -1.77
ECM16YMR128W SQT1P35184 431 aa3.97□□□□□ -1.77
ECM16YMR128W SCS2P40075 244 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W RSC8P43609 557 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W YGL039WP53183 348 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W TEP1P53916 434 aa3.97□□□□□ -1.77
ECM16YMR128W BUD22Q04347 519 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W ORM2Q06144 216 aa3.97□□□□□ -1.77
ECM16YMR128W YPL277CQ08989 487 aa3.97□□□□□ -1.77
ECM16YMR128W MED1Q12321 566 aa3.97□□□□□ -1.77
ECM16YMR128W YPT6Q99260 215 aa3.97□□□□□ -1.77
ECM16YMR128W TY1B-AO13527 1196 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W SBP1P10080 294 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W RPL8AP17076 256 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W AFG2P32794 780 aa3.97□□□□□ -1.77
ECM16YMR128W TIM23P32897 222 aa3.97□□□□□ -1.77
ECM16YMR128W RPS0AP32905 252 aaKnown RBP3.97□□□□□ -1.77
ECM16YMR128W YJL107CP42947 387 aa3.97□□□□□ -1.77
ECM16YMR128W YJR098CP47139 656 aa3.97□□□□□ -1.77
ECM16YMR128W LYS4P49367 693 aaPredicted RBP3.97□□□□□ -1.77
ECM16YMR128W TAN1P53072 289 aaPredicted RBP3.97□□□□□ -1.77
ECM16YMR128W ORC4P54791 529 aa3.97□□□□□ -1.77
ECM16YMR128W YML119WQ03208 357 aa3.97□□□□□ -1.77
ECM16YMR128W ACL4Q03771 387 aa3.97□□□□□ -1.77
ECM16YMR128W YDR222WQ04925 415 aa3.97□□□□□ -1.77
ECM16YMR128W SKG3Q06315 1026 aa3.97□□□□□ -1.77
ECM16YMR128W GPN2Q08726 347 aaPredicted RBP3.97□□□□□ -1.77
ECM16YMR128W YAK1P14680 807 aa3.96□□□□□ -1.77
ECM16YMR128W RRT12P25381 491 aa3.96□□□□□ -1.77
ECM16YMR128W SMY1P32364 656 aaKnown RBP3.96□□□□□ -1.77
ECM16YMR128W EUG1P32474 517 aa3.96□□□□□ -1.77
ECM16YMR128W TFC4P33339 1025 aa3.96□□□□□ -1.77
ECM16YMR128W TFC3P34111 1160 aa3.96□□□□□ -1.77
ECM16YMR128W AST1P35183 429 aa3.96□□□□□ -1.77
ECM16YMR128W DUG2P38149 878 aa3.96□□□□□ -1.77
ECM16YMR128W YDR089WP38966 869 aa3.96□□□□□ -1.77
ECM16YMR128W BEM4P39011 633 aa3.96□□□□□ -1.77
ECM16YMR128W ALG5P40350 334 aa3.96□□□□□ -1.77
ECM16YMR128W NUP82P40368 713 aa3.96□□□□□ -1.77
ECM16YMR128W HOS4P40480 1083 aa3.96□□□□□ -1.77
ECM16YMR128W TAF1P46677 1066 aa3.96□□□□□ -1.77
ECM16YMR128W SGM1P47166 707 aa3.96□□□□□ -1.77
ECM16YMR128W RNR4P49723 345 aaKnown RBP3.96□□□□□ -1.77
ECM16YMR128W YNR065CP53751 1116 aa3.96□□□□□ -1.77
ECM16YMR128W JJJ1P53863 590 aa3.96□□□□□ -1.77
ECM16YMR128W FUS2Q05670 677 aa3.96□□□□□ -1.77
ECM16YMR128W TSR1Q07381 788 aaKnown RBP3.96□□□□□ -1.77
ECM16YMR128W WHI4Q07655 649 aaKnown RBP3.96□□□□□ -1.77
ECM16YMR128W PHR1P05066 565 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
ECM16YMR128W CHS2P14180 963 aa3.96□□□□□ -1.78
ECM16YMR128W DAL2P25335 343 aa3.96□□□□□ -1.78
ECM16YMR128W NPP1P25353 742 aa3.96□□□□□ -1.78
ECM16YMR128W GFD2P25370 566 aaKnown RBP3.96□□□□□ -1.78
ECM16YMR128W PAN5P38787 379 aa3.96□□□□□ -1.78
ECM16YMR128W DSE1P40077 573 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms