RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C SNL1P40548 159 aa2.46□□□□□ -2.02
VPS13YLL040C SNZ3P43545 298 aa2.46□□□□□ -2.02
VPS13YLL040C SNZ2P53824 298 aa2.46□□□□□ -2.02
VPS13YLL040C PEX29Q03370 554 aa2.46□□□□□ -2.02
VPS13YLL040C CEF1Q03654 590 aaPredicted RBP2.46□□□□□ -2.02
VPS13YLL040C CDA1Q06702 301 aa2.46□□□□□ -2.02
VPS13YLL040C PEX15Q08215 383 aa2.46□□□□□ -2.02
VPS13YLL040C OSW1Q08692 278 aa2.46□□□□□ -2.02
VPS13YLL040C AI5_BETAQ9ZZX0 354 aa2.46□□□□□ -2.02
VPS13YLL040C ATR1P13090 542 aa2.46□□□□□ -2.02
VPS13YLL040C FLO10P36170 1169 aa2.46□□□□□ -2.02
VPS13YLL040C RIB1P38066 345 aa2.46□□□□□ -2.02
VPS13YLL040C KTR4P38131 464 aa2.46□□□□□ -2.02
VPS13YLL040C OTU2P38747 307 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C CAB2P40506 365 aa2.46□□□□□ -2.02
VPS13YLL040C KEL3Q08979 651 aaPredicted RBP2.46□□□□□ -2.02
VPS13YLL040C ZRT2Q12436 422 aa2.46□□□□□ -2.02
VPS13YLL040C MSD1P15179 658 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C STI1P15705 589 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02 RIP-Chip
VPS13YLL040C RPT1P33299 467 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C RIM2P38127 377 aa2.46□□□□□ -2.02
VPS13YLL040C YFR006WP43590 535 aa2.46□□□□□ -2.02
VPS13YLL040C YJL181WP46987 611 aa2.46□□□□□ -2.02
VPS13YLL040C ALT2P52892 507 aa2.46□□□□□ -2.02
VPS13YLL040C RPT4P53549 437 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C ARK1P53974 638 aa2.46□□□□□ -2.02
VPS13YLL040C YOL098CQ12496 1037 aa2.46□□□□□ -2.02
VPS13YLL040C CTT1P06115 562 aa2.46□□□□□ -2.02
VPS13YLL040C MUM2P38236 366 aa2.46□□□□□ -2.02
VPS13YLL040C RIC1P40395 1056 aa2.46□□□□□ -2.02
VPS13YLL040C RFX1P48743 811 aa2.46□□□□□ -2.02
VPS13YLL040C ORC5P50874 479 aa2.46□□□□□ -2.02
VPS13YLL040C ORM1P53224 222 aa2.46□□□□□ -2.02
VPS13YLL040C RAD30Q04049 632 aa2.46□□□□□ -2.02
VPS13YLL040C BUD22Q04347 519 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C LCB5Q06147 687 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C HER1Q12276 1246 aa2.46□□□□□ -2.02
VPS13YLL040C QCR7P00128 127 aa2.46□□□□□ -2.02
VPS13YLL040C TPK2P06245 380 aa2.46□□□□□ -2.02
VPS13YLL040C SWI6P09959 803 aa2.46□□□□□ -2.02
VPS13YLL040C SEC63P14906 663 aa2.46□□□□□ -2.02
VPS13YLL040C PCF11P39081 626 aaPredicted RBP2.46□□□□□ -2.02
VPS13YLL040C NUP60P39705 539 aa2.46□□□□□ -2.02
VPS13YLL040C SSP120P39931 234 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C UBP9P39967 754 aa2.46□□□□□ -2.02
VPS13YLL040C REX2P54964 269 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C UFO1Q04511 668 aa2.46□□□□□ -2.02
VPS13YLL040C COQ9Q05779 260 aa2.46□□□□□ -2.02
VPS13YLL040C CDC33P07260 213 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C MIS1P09440 975 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C SAM2P19358 384 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C PUS6P53294 404 aa2.46□□□□□ -2.02
VPS13YLL040C YDR018CQ12185 396 aa2.46□□□□□ -2.02
VPS13YLL040C PWP2P25635 923 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C NOP4P37838 685 aaKnown RBP2.46□□□□□ -2.02
VPS13YLL040C YKU80Q04437 629 aa2.46□□□□□ -2.02
VPS13YLL040C ENT2Q05785 613 aa2.46□□□□□ -2.02
VPS13YLL040C RSC2Q06488 889 aa2.46□□□□□ -2.02
VPS13YLL040C HPR1P17629 752 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C PRP6P19735 899 aaPredicted RBP2.45□□□□□ -2.02
VPS13YLL040C CMK2P22517 447 aa2.45□□□□□ -2.02
VPS13YLL040C HSP30P25619 332 aa2.45□□□□□ -2.02
VPS13YLL040C PRO3P32263 286 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C RPN2P32565 945 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C PGM2P37012 569 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C RDH54P38086 958 aa2.45□□□□□ -2.02
VPS13YLL040C FRT2P39734 528 aa2.45□□□□□ -2.02
VPS13YLL040C YEL025CP39991 1188 aa2.45□□□□□ -2.02
VPS13YLL040C YJR061WP40355 935 aa2.45□□□□□ -2.02
VPS13YLL040C IWR1Q07532 353 aaPredicted RBP2.45□□□□□ -2.02
VPS13YLL040C MCD1Q12158 566 aa2.45□□□□□ -2.02
VPS13YLL040C ARG80P07249 177 aa2.45□□□□□ -2.02
VPS13YLL040C SSA4P22202 642 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C SUL1P38359 859 aa2.45□□□□□ -2.02
VPS13YLL040C HXT6P39003 570 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C HXT7P39004 570 aa2.45□□□□□ -2.02
VPS13YLL040C RPL34BP40525 121 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C YTP1P53584 459 aa2.45□□□□□ -2.02
VPS13YLL040C YDR239CQ03780 787 aa2.45□□□□□ -2.02
VPS13YLL040C RRG1Q12167 365 aaPredicted RBP2.45□□□□□ -2.02
VPS13YLL040C AEP1P32493 518 aa2.45□□□□□ -2.02
VPS13YLL040C HSP78P33416 811 aa2.45□□□□□ -2.02
VPS13YLL040C YHL012WP38709 493 aa2.45□□□□□ -2.02
VPS13YLL040C RRN7P40992 514 aa2.45□□□□□ -2.02
VPS13YLL040C BNA6P43619 295 aa2.45□□□□□ -2.02
VPS13YLL040C COS6P53344 381 aa2.45□□□□□ -2.02
VPS13YLL040C YPL109CQ02981 657 aa2.45□□□□□ -2.02
VPS13YLL040C TRS120Q04183 1289 aa2.45□□□□□ -2.02
VPS13YLL040C UTP14Q04500 899 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C ADY4Q05955 493 aa2.45□□□□□ -2.02
VPS13YLL040C ICL1P28240 557 aaPredicted RBP2.45□□□□□ -2.02
VPS13YLL040C HEL1P36113 551 aa2.45□□□□□ -2.02
VPS13YLL040C VRP1P37370 817 aa2.45□□□□□ -2.02
VPS13YLL040C VHR1P40522 640 aa2.45□□□□□ -2.02
VPS13YLL040C EMW1P42842 904 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C GUP1P53154 560 aa2.45□□□□□ -2.02
VPS13YLL040C ECM11Q04110 302 aa2.45□□□□□ -2.02
VPS13YLL040C EFG1Q3E705 233 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C THS1P04801 734 aaKnown RBP2.45□□□□□ -2.02
VPS13YLL040C DBR1P24309 405 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms