RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C NSI1Q12457 570 aa3.24□□□□□ -1.89
RPN1YHR027C RPS17AP02407 136 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C STE12P13574 688 aa3.24□□□□□ -1.89
RPN1YHR027C RPS17BP14127 136 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C RDS2P19541 446 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C PRP9P19736 530 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C KIN3P22209 435 aa3.24□□□□□ -1.89
RPN1YHR027C CPR3P25719 182 aa3.24□□□□□ -1.89
RPN1YHR027C TYE7P33122 291 aaPredicted RBP3.24□□□□□ -1.89
RPN1YHR027C YKL050CP35736 922 aa3.24□□□□□ -1.89
RPN1YHR027C STB6P36085 766 aa3.24□□□□□ -1.89
RPN1YHR027C MET1P36150 593 aa3.24□□□□□ -1.89
RPN1YHR027C ECM21P38167 1117 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C MTG2P38860 518 aa3.24□□□□□ -1.89
RPN1YHR027C DSS1P39112 969 aa3.24□□□□□ -1.89
RPN1YHR027C DAN4P47179 1161 aa3.24□□□□□ -1.89
RPN1YHR027C ARC35P53731 342 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C CNM67P53865 581 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C YNL115CP53925 644 aa3.24□□□□□ -1.89
RPN1YHR027C ADE16P54113 591 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C PRO2P54885 456 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C DLT1Q04216 342 aa3.24□□□□□ -1.89
RPN1YHR027C SOV1Q04748 898 aa3.24□□□□□ -1.89
RPN1YHR027C ATG38Q05789 226 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C BRE4Q07660 1125 aa3.24□□□□□ -1.89
RPN1YHR027C ISA1Q07821 250 aaPredicted RBP3.24□□□□□ -1.89
RPN1YHR027C PUS7Q08647 676 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C SPE3Q12074 293 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C SEC7P11075 2009 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C URA3P03962 267 aa3.23□□□□□ -1.89
RPN1YHR027C HSF1P10961 833 aa3.23□□□□□ -1.89
RPN1YHR027C PFK2P16862 959 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RPN1YHR027C MRPL33P20084 86 aa3.23□□□□□ -1.89
RPN1YHR027C HXT2P23585 541 aa3.23□□□□□ -1.89
RPN1YHR027C MCM3P24279 971 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C CWH43P25618 953 aa3.23□□□□□ -1.89
RPN1YHR027C KRE2P27809 442 aa3.23□□□□□ -1.89
RPN1YHR027C YBL010CP32788 280 aa3.23□□□□□ -1.89
RPN1YHR027C SRP101P32916 621 aa3.23□□□□□ -1.89
RPN1YHR027C DOM34P33309 386 aa3.23□□□□□ -1.89
RPN1YHR027C MAL31P38156 614 aa3.23□□□□□ -1.89
RPN1YHR027C RFS1P38234 210 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C BSD2P38356 321 aa3.23□□□□□ -1.89
RPN1YHR027C RCK2P38623 610 aa3.23□□□□□ -1.89
RPN1YHR027C GRE3P38715 327 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RPN1YHR027C YJL049WP47048 450 aa3.23□□□□□ -1.89
RPN1YHR027C MAL11P53048 616 aa3.23□□□□□ -1.89
RPN1YHR027C MET13P53128 600 aa3.23□□□□□ -1.89
RPN1YHR027C DRN1P53255 507 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C GOR1P53839 350 aa3.23□□□□□ -1.89
RPN1YHR027C ORC3P54790 616 aa3.23□□□□□ -1.89
RPN1YHR027C UBP2Q01476 1272 aa3.23□□□□□ -1.89
RPN1YHR027C MAK10Q02197 733 aa3.23□□□□□ -1.89
RPN1YHR027C ACL4Q03771 387 aa3.23□□□□□ -1.89
RPN1YHR027C RAD30Q04049 632 aa3.23□□□□□ -1.89
RPN1YHR027C RPN9Q04062 393 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C UTP5Q04177 643 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C HCR1Q05775 265 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C TDA5Q06417 326 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C ADR1P07248 1323 aa3.23□□□□□ -1.89
RPN1YHR027C SIR3P06701 978 aa3.23□□□□□ -1.89
RPN1YHR027C CDC24P11433 854 aaPredicted RBP3.23□□□□□ -1.89
RPN1YHR027C ATR1P13090 542 aa3.23□□□□□ -1.89
RPN1YHR027C SEC18P18759 758 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C FBP26P32604 452 aa3.23□□□□□ -1.89
RPN1YHR027C CPR5P35176 225 aa3.23□□□□□ -1.89
RPN1YHR027C HES1P35843 434 aa3.23□□□□□ -1.89
RPN1YHR027C NTR2P36118 322 aaPredicted RBP3.23□□□□□ -1.89
RPN1YHR027C UTP30P36144 274 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C MIP6P38760 659 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C VFA1P40080 203 aa3.23□□□□□ -1.89
RPN1YHR027C YTA12P40341 825 aa3.23□□□□□ -1.89
RPN1YHR027C YGR210CP42942 411 aa3.23□□□□□ -1.89
RPN1YHR027C IES1P43579 692 aa3.23□□□□□ -1.89
RPN1YHR027C LYS4P49367 693 aaPredicted RBP3.23□□□□□ -1.89
RPN1YHR027C ZIP2P53061 704 aa3.23□□□□□ -1.89
RPN1YHR027C NAF1P53919 492 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C SED5Q01590 340 aa3.23□□□□□ -1.89
RPN1YHR027C MDM1Q01846 1127 aa3.23□□□□□ -1.89
RPN1YHR027C PKH3Q03306 898 aaPredicted RBP3.23□□□□□ -1.89
RPN1YHR027C YMR114CQ04471 368 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C RNH1Q04740 348 aa3.23□□□□□ -1.89
RPN1YHR027C PNP1Q05788 311 aa3.23□□□□□ -1.89
RPN1YHR027C ECI1Q05871 280 aa3.23□□□□□ -1.89
RPN1YHR027C FRA1Q07825 749 aa3.23□□□□□ -1.89
RPN1YHR027C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RPN1YHR027C ICL2Q12031 575 aa3.23□□□□□ -1.89
RPN1YHR027C VPS54Q12071 889 aa3.23□□□□□ -1.89
RPN1YHR027C HUA2Q12134 243 aa3.23□□□□□ -1.89
RPN1YHR027C PGA3Q12746 312 aaKnown RBP3.23□□□□□ -1.89
RPN1YHR027C ATP6P00854 259 aa3.22□□□□□ -1.89
RPN1YHR027C PPR1P07272 904 aaPredicted RBP3.22□□□□□ -1.89
RPN1YHR027C CAD1P24813 409 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C PTP1P25044 335 aa3.22□□□□□ -1.89
RPN1YHR027C RVS161P25343 265 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C ZIP1P31111 875 aa3.22□□□□□ -1.89
RPN1YHR027C VMA6P32366 345 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C ALG14P38242 237 aa3.22□□□□□ -1.89
RPN1YHR027C SMC2P38989 1170 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C IES5P40060 125 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms