RNA–Protein interactions for RNA: YGL044C

RNA15, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeast

Gene RNA15, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNA15	YGL044C	VPS8	P39702	1274 aa		4.94	□□□□□ -1.62
RNA15	YGL044C	NOC2	P39744	710 aa	Known RBP	4.94	□□□□□ -1.62
RNA15	YGL044C	PCI8	P40512	444 aa		4.94	□□□□□ -1.62
RNA15	YGL044C	FYV8	P46949	817 aa	Known RBP	4.94	□□□□□ -1.62
RNA15	YGL044C	VPS60	Q03390	229 aa		4.94	□□□□□ -1.62
RNA15	YGL044C	MMR1	Q06324	491 aa		4.94	□□□□□ -1.62
RNA15	YGL044C	FOB1	O13329	566 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	ALG7	P07286	448 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	PET111	P08468	800 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	RIT1	P23796	513 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	SAC6	P32599	642 aa	Known RBP	4.93	□□□□□ -1.62
RNA15	YGL044C	YBR284W	P38150	797 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	VID27	P40157	782 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	VTC2	P43585	828 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	YGL138C	P53122	345 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	RET3	P53600	189 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	VPS75	P53853	264 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	RNT1	Q02555	471 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	YML122C	Q03207	126 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	WAR1	Q03631	944 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	CSM3	Q04659	317 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	CRF1	Q04930	467 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	EIS1	Q05050	843 aa	Known RBP	4.93	□□□□□ -1.62
RNA15	YGL044C	KEL3	Q08979	651 aa	Predicted RBP	4.93	□□□□□ -1.62
RNA15	YGL044C	YPR071W	Q12346	211 aa		4.93	□□□□□ -1.62
RNA15	YGL044C	MET6	P05694	767 aa	Known RBP	4.92	□□□□□ -1.62
RNA15	YGL044C	THR4	P16120	514 aa	Known RBP	4.92	□□□□□ -1.62
RNA15	YGL044C	RFA1	P22336	621 aa	Known RBP	4.92	□□□□□ -1.62
RNA15	YGL044C	PRE8	P23639	250 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	URA1	P28272	314 aa	Predicted RBP	4.92	□□□□□ -1.62
RNA15	YGL044C	SMY1	P32364	656 aa	Known RBP	4.92	□□□□□ -1.62
RNA15	YGL044C	HIR1	P32479	840 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	RPT3	P33298	428 aa	Known RBP	4.92	□□□□□ -1.62
RNA15	YGL044C	CTF13	P35203	478 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	EFM2	P38347	419 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RNA15	YGL044C	FOL1	P53848	824 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	ALF1	P53904	254 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	MDM1	Q01846	1127 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	YKR011C	Q02209	353 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	DSE3	Q08729	430 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	MCH5	Q08777	521 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	RRG1	Q12167	365 aa	Predicted RBP	4.92	□□□□□ -1.62
RNA15	YGL044C	YOR111W	Q99210	232 aa		4.92	□□□□□ -1.62
RNA15	YGL044C	CIT1	P00890	479 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	PPR1	P07272	904 aa	Predicted RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	CKA2	P19454	339 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	PHO13	P19881	312 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	PRP4	P20053	465 aa	Known RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	MCM4	P30665	933 aa	Known RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	SRP40	P32583	406 aa	Predicted RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	TYE7	P33122	291 aa	Predicted RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	SAS3	P34218	831 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	CTF8	P38877	133 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	THI6	P41835	540 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	ALR2	P43553	858 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	CCM1	P48237	864 aa	Predicted RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	SSL2	Q00578	843 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	VPS30	Q02948	557 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	VMS1	Q04311	632 aa	Known RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	SKG3	Q06315	1026 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	OMS1	Q06668	471 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	UBX5	Q06682	500 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	FMP25	Q08023	583 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	SLK19	Q08581	821 aa	Known RBP	4.91	□□□□□ -1.62
RNA15	YGL044C	PLP2	Q12017	286 aa		4.91	□□□□□ -1.62
RNA15	YGL044C	QCR6	P00127	147 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	HIS4	P00815	799 aa	Known RBP	4.9	□□□□□ -1.63
RNA15	YGL044C	NUC1	P08466	329 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	CAF20	P12962	161 aa	Known RBP	4.9	□□□□□ -1.63
RNA15	YGL044C	RPL8A	P17076	256 aa	Known RBP	4.9	□□□□□ -1.63
RNA15	YGL044C	VPS1	P21576	704 aa	Known RBP	4.9	□□□□□ -1.63
RNA15	YGL044C	MRC1	P25588	1096 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	PWP2	P25635	923 aa	Known RBP	4.9	□□□□□ -1.63
RNA15	YGL044C	YEL043W	P32618	956 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	REC104	P33323	182 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	RRP1	P35178	278 aa	Predicted RBP	4.9	□□□□□ -1.63
RNA15	YGL044C	CTM1	P38818	585 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	STT3	P39007	718 aa	Known RBP	4.9	□□□□□ -1.63
RNA15	YGL044C	CAJ1	P39101	391 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	LSB1	P53281	241 aa		4.9	□□□□□ -1.63
RNA15	YGL044C	CDC37	P06101	506 aa	Known RBP	4.89	□□□□□ -1.63
RNA15	YGL044C	PRP9	P19736	530 aa	Known RBP	4.89	□□□□□ -1.63
RNA15	YGL044C	CDC15	P27636	974 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	MFT1	P33441	392 aa	Known RBP	4.89	□□□□□ -1.63
RNA15	YGL044C	PXL1	P36166	706 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	VPS45	P38932	577 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	SHC1	P39000	512 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	CSM2	P40465	213 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	TPO2	P53283	614 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	BNI5	P53890	448 aa	Known RBP	4.89	□□□□□ -1.63
RNA15	YGL044C	SEC5	P89102	971 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	VPS38	Q05919	439 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	ACF2	Q12168	779 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	SFI1	Q12369	946 aa		4.89	□□□□□ -1.63
RNA15	YGL044C	FIG2	P25653	1609 aa		4.88	□□□□□ -1.63
RNA15	YGL044C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RNA15	YGL044C	MSM1	P22438	575 aa		4.88	□□□□□ -1.63
RNA15	YGL044C	SPO11	P23179	398 aa		4.88	□□□□□ -1.63
RNA15	YGL044C	LTV1	P34078	463 aa		4.88	□□□□□ -1.63

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