RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C OSH2Q12451 1283 aa2.84□□□□□ -1.95
PRE4YFR050C HIS4P00815 799 aaKnown RBP2.83□□□□□ -1.96
PRE4YFR050C SPE1P08432 466 aa2.83□□□□□ -1.96
PRE4YFR050C SEC21P32074 935 aaKnown RBP2.83□□□□□ -1.96
PRE4YFR050C CDC11P32458 415 aa2.83□□□□□ -1.96
PRE4YFR050C GRX4P32642 244 aa2.83□□□□□ -1.96
PRE4YFR050C STE5P32917 917 aa2.83□□□□□ -1.96
PRE4YFR050C YKL151CP36059 337 aa2.83□□□□□ -1.96
PRE4YFR050C YRO2P38079 344 aa2.83□□□□□ -1.96
PRE4YFR050C ECM21P38167 1117 aaKnown RBP2.83□□□□□ -1.96
PRE4YFR050C GIC1P38785 314 aa2.83□□□□□ -1.96
PRE4YFR050C ALR2P43553 858 aa2.83□□□□□ -1.96
PRE4YFR050C GUS1P46655 708 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
PRE4YFR050C TIM54P47045 478 aa2.83□□□□□ -1.96
PRE4YFR050C ERP6P53198 216 aa2.83□□□□□ -1.96
PRE4YFR050C YAP6Q03935 383 aa2.83□□□□□ -1.96
PRE4YFR050C BMS1Q08965 1183 aaKnown RBP2.83□□□□□ -1.96
PRE4YFR050C RTK1Q12100 620 aaPredicted RBP2.83□□□□□ -1.96
PRE4YFR050C PDH1Q12428 516 aaKnown RBP2.83□□□□□ -1.96
PRE4YFR050C RIF1P29539 1916 aa2.82□□□□□ -1.96
PRE4YFR050C GAL4P04386 881 aa2.82□□□□□ -1.96
PRE4YFR050C EMC1P25574 760 aa2.82□□□□□ -1.96
PRE4YFR050C ARE1P25628 610 aa2.82□□□□□ -1.96
PRE4YFR050C DOM34P33309 386 aa2.82□□□□□ -1.96
PRE4YFR050C SAP190P36123 1033 aa2.82□□□□□ -1.96
PRE4YFR050C CST26P38226 397 aa2.82□□□□□ -1.96
PRE4YFR050C MED6P38782 295 aa2.82□□□□□ -1.96
PRE4YFR050C RTS1P38903 757 aa2.82□□□□□ -1.96
PRE4YFR050C TAT2P38967 592 aa2.82□□□□□ -1.96
PRE4YFR050C MPT5P39016 859 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
PRE4YFR050C FUN12P39730 1002 aaKnown RBP2.82□□□□□ -1.96
PRE4YFR050C NOP2P40991 618 aaKnown RBP2.82□□□□□ -1.96
PRE4YFR050C NRM1P53718 249 aa2.82□□□□□ -1.96
PRE4YFR050C CLU1Q03690 1277 aaKnown RBP2.82□□□□□ -1.96
PRE4YFR050C TMA10Q06177 86 aa2.82□□□□□ -1.96
PRE4YFR050C TPO1Q07824 586 aa2.82□□□□□ -1.96
PRE4YFR050C YPL272CQ08984 517 aa2.82□□□□□ -1.96
PRE4YFR050C RAD18P10862 487 aa2.81□□□□□ -1.96
PRE4YFR050C HMG2P12684 1045 aa2.81□□□□□ -1.96
PRE4YFR050C SEC18P18759 758 aaKnown RBP2.81□□□□□ -1.96
PRE4YFR050C HSP60P19882 572 aaKnown RBP2.81□□□□□ -1.96
PRE4YFR050C YCR015CP25616 317 aa2.81□□□□□ -1.96
PRE4YFR050C CDC20P26309 610 aa2.81□□□□□ -1.96
PRE4YFR050C RPC82P32349 654 aa2.81□□□□□ -1.96
PRE4YFR050C YKR078WP36158 585 aaKnown RBP2.81□□□□□ -1.96
PRE4YFR050C PIM1P36775 1133 aa2.81□□□□□ -1.96
PRE4YFR050C LSM4P40070 187 aaKnown RBP2.81□□□□□ -1.96
PRE4YFR050C SAD1P43589 448 aa2.81□□□□□ -1.96
PRE4YFR050C YJL049WP47048 450 aa2.81□□□□□ -1.96
PRE4YFR050C GYP7P48365 746 aa2.81□□□□□ -1.96
PRE4YFR050C MOT3P54785 490 aaKnown RBP2.81□□□□□ -1.96
PRE4YFR050C FMP25Q08023 583 aa2.81□□□□□ -1.96
PRE4YFR050C NOP12Q08208 459 aaKnown RBP2.81□□□□□ -1.96
PRE4YFR050C HMI1Q12039 706 aa2.81□□□□□ -1.96
PRE4YFR050C MPD2Q99316 277 aa2.81□□□□□ -1.96
PRE4YFR050C CDC6P09119 513 aa2.8□□□□□ -1.96
PRE4YFR050C RFA1P22336 621 aaKnown RBP2.8□□□□□ -1.96
PRE4YFR050C TKL1P23254 680 aaKnown RBP2.8□□□□□ -1.96
PRE4YFR050C RPL8BP29453 256 aaKnown RBP2.8□□□□□ -1.96
PRE4YFR050C ATG19P35193 415 aa2.8□□□□□ -1.96
PRE4YFR050C MRPL7P36519 292 aa2.8□□□□□ -1.96
PRE4YFR050C YBR284WP38150 797 aa2.8□□□□□ -1.96
PRE4YFR050C REG2P38232 338 aa2.8□□□□□ -1.96
PRE4YFR050C TSL1P38427 1098 aaKnown RBP2.8□□□□□ -1.96
PRE4YFR050C SIT1P39980 628 aa2.8□□□□□ -1.96
PRE4YFR050C NPP2P39997 493 aa2.8□□□□□ -1.96
PRE4YFR050C MET12P46151 657 aa2.8□□□□□ -1.96
PRE4YFR050C PFD1P46988 109 aa2.8□□□□□ -1.96
PRE4YFR050C CCM1P48237 864 aaPredicted RBP2.8□□□□□ -1.96
PRE4YFR050C VPS30Q02948 557 aa2.8□□□□□ -1.96
PRE4YFR050C YLR224WQ05947 369 aa2.8□□□□□ -1.96
PRE4YFR050C CDA1Q06702 301 aa2.8□□□□□ -1.96
PRE4YFR050C NOT3P06102 836 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C PFK1P16861 987 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C STE11P23561 717 aa2.79□□□□□ -1.96
PRE4YFR050C CTS1P29029 562 aa2.79□□□□□ -1.96
PRE4YFR050C HBS1P32769 611 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C REC104P33323 182 aa2.79□□□□□ -1.96
PRE4YFR050C TGL1P34163 548 aa2.79□□□□□ -1.96
PRE4YFR050C SHM2P37291 469 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C WSC4P38739 605 aa2.79□□□□□ -1.96
PRE4YFR050C PLB1P39105 664 aa2.79□□□□□ -1.96
PRE4YFR050C NNF1P47149 201 aa2.79□□□□□ -1.96
PRE4YFR050C RPS7BP48164 190 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C MNN10P50108 393 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C RAI1P53063 387 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C TAP42Q04372 366 aa2.79□□□□□ -1.96
PRE4YFR050C TMA64Q04600 565 aaKnown RBP2.79□□□□□ -1.96
PRE4YFR050C ADY3Q07732 790 aa2.79□□□□□ -1.96
PRE4YFR050C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96 RIP-Chip
PRE4YFR050C YPR071WQ12346 211 aa2.79□□□□□ -1.96
PRE4YFR050C MLP1Q02455 1875 aaKnown RBP2.78□□□□□ -1.96
PRE4YFR050C NPP1P25353 742 aa2.78□□□□□ -1.96
PRE4YFR050C PEX34P25584 144 aa2.78□□□□□ -1.96
PRE4YFR050C LST4P34239 828 aa2.78□□□□□ -1.96
PRE4YFR050C SRX1P36077 127 aa2.78□□□□□ -1.96
PRE4YFR050C AKL1P38080 1108 aaKnown RBP2.78□□□□□ -1.96
PRE4YFR050C NUG1P40010 520 aaKnown RBP2.78□□□□□ -1.96
PRE4YFR050C TOK1P40310 691 aa2.78□□□□□ -1.96
PRE4YFR050C UTP8P53276 713 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms