RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SSL1Q04673 461 aaPredicted RBP3.84□□□□□ -1.79
CDC40YDR364C BRE1Q07457 700 aaKnown RBP3.84□□□□□ -1.79
CDC40YDR364C YAP7Q08182 245 aa3.84□□□□□ -1.79
CDC40YDR364C YTM1Q12024 460 aaPredicted RBP3.84□□□□□ -1.79
CDC40YDR364C GAL1P04385 528 aa3.83□□□□□ -1.8
CDC40YDR364C CAF20P12962 161 aaKnown RBP3.83□□□□□ -1.8
CDC40YDR364C HCA4P20448 770 aaKnown RBP3.83□□□□□ -1.8
CDC40YDR364C OSM1P21375 501 aaKnown RBP3.83□□□□□ -1.8
CDC40YDR364C PTP2P29461 750 aa3.83□□□□□ -1.8
CDC40YDR364C TMT1P32643 299 aa3.83□□□□□ -1.8
CDC40YDR364C STE13P33894 931 aa3.83□□□□□ -1.8
CDC40YDR364C YEL1P34225 687 aa3.83□□□□□ -1.8
CDC40YDR364C TRZ1P36159 838 aaPredicted RBP3.83□□□□□ -1.8
CDC40YDR364C FLO10P36170 1169 aa3.83□□□□□ -1.8
CDC40YDR364C ERT1P38140 529 aa3.83□□□□□ -1.8
CDC40YDR364C TSL1P38427 1098 aaKnown RBP3.83□□□□□ -1.8
CDC40YDR364C CKB2P38930 258 aa3.83□□□□□ -1.8
CDC40YDR364C SIT1P39980 628 aa3.83□□□□□ -1.8
CDC40YDR364C IES5P40060 125 aa3.83□□□□□ -1.8
CDC40YDR364C AIM14P53109 570 aa3.83□□□□□ -1.8
CDC40YDR364C YIL177CP40434 1758 aa3.82□□□□□ -1.8
CDC40YDR364C YJL225CP40889 1758 aa3.82□□□□□ -1.8
CDC40YDR364C FKS3Q04952 1785 aa3.82□□□□□ -1.8
CDC40YDR364C TUB3P09734 445 aaKnown RBP3.82□□□□□ -1.8
CDC40YDR364C PER1P25625 357 aa3.82□□□□□ -1.8
CDC40YDR364C REC104P33323 182 aa3.82□□□□□ -1.8
CDC40YDR364C YKR075CP36155 307 aa3.82□□□□□ -1.8
CDC40YDR364C OAF1P39720 1047 aaPredicted RBP3.82□□□□□ -1.8
CDC40YDR364C DOT6P40059 670 aaKnown RBP3.82□□□□□ -1.8
CDC40YDR364C TOK1P40310 691 aa3.82□□□□□ -1.8
CDC40YDR364C GYP8P43570 497 aa3.82□□□□□ -1.8
CDC40YDR364C CSI1Q04368 295 aa3.82□□□□□ -1.8
CDC40YDR364C RSC3Q06639 885 aa3.82□□□□□ -1.8
CDC40YDR364C RMP1Q12530 201 aa3.82□□□□□ -1.8
CDC40YDR364C MRP7P12687 371 aa3.81□□□□□ -1.8
CDC40YDR364C CDC43P18898 376 aa3.81□□□□□ -1.8
CDC40YDR364C CDC48P25694 835 aaKnown RBP3.81□□□□□ -1.8
CDC40YDR364C SSH4P32343 579 aa3.81□□□□□ -1.8
CDC40YDR364C DAL3P32459 195 aa3.81□□□□□ -1.8
CDC40YDR364C RAD24P32641 659 aa3.81□□□□□ -1.8
CDC40YDR364C MFT1P33441 392 aaKnown RBP3.81□□□□□ -1.8
CDC40YDR364C CTF8P38877 133 aa3.81□□□□□ -1.8
CDC40YDR364C RPN11P43588 306 aaKnown RBP3.81□□□□□ -1.8
CDC40YDR364C DUG1P43616 481 aaKnown RBP3.81□□□□□ -1.8
CDC40YDR364C YGR153WP48238 217 aa3.81□□□□□ -1.8
CDC40YDR364C NIT3P49954 291 aa3.81□□□□□ -1.8
CDC40YDR364C DAM1P53267 343 aa3.81□□□□□ -1.8
CDC40YDR364C SPO1P53541 631 aa3.81□□□□□ -1.8
CDC40YDR364C ZDS2P54786 942 aa3.81□□□□□ -1.8
CDC40YDR364C YDR514CQ04408 483 aa3.81□□□□□ -1.8
CDC40YDR364C PHM6Q05637 104 aa3.81□□□□□ -1.8
CDC40YDR364C ARO10Q06408 635 aa3.81□□□□□ -1.8
CDC40YDR364C MET7Q08645 548 aa3.81□□□□□ -1.8
CDC40YDR364C SWM1Q12379 170 aa3.81□□□□□ -1.8
CDC40YDR364C URB1P34241 1764 aaKnown RBP3.81□□□□□ -1.8
CDC40YDR364C NUP133P36161 1157 aa3.8□□□□□ -1.8
CDC40YDR364C YNG2P38806 282 aaKnown RBP3.8□□□□□ -1.8
CDC40YDR364C YIL166CP40445 542 aa3.8□□□□□ -1.8
CDC40YDR364C HIS6P40545 261 aa3.8□□□□□ -1.8
CDC40YDR364C GZF3P42944 551 aaKnown RBP3.8□□□□□ -1.8
CDC40YDR364C CAF16P43569 289 aa3.8□□□□□ -1.8
CDC40YDR364C CCM1P48237 864 aaPredicted RBP3.8□□□□□ -1.8
CDC40YDR364C MUP1P50276 574 aa3.8□□□□□ -1.8
CDC40YDR364C SNP1Q00916 300 aaPredicted RBP3.8□□□□□ -1.8
CDC40YDR364C GIR2Q03768 265 aaPredicted RBP3.8□□□□□ -1.8
CDC40YDR364C VPS64Q03944 604 aa3.8□□□□□ -1.8
CDC40YDR364C MLC2Q06580 163 aa3.8□□□□□ -1.8
CDC40YDR364C SSP2Q08646 371 aa3.8□□□□□ -1.8
CDC40YDR364C RRP6Q12149 733 aaKnown RBP3.8□□□□□ -1.8
CDC40YDR364C RPS19AP07280 144 aaKnown RBP3.79□□□□□ -1.8
CDC40YDR364C RPS19BP07281 144 aaPredicted RBP3.79□□□□□ -1.8
CDC40YDR364C GFD2P25370 566 aaKnown RBP3.79□□□□□ -1.8
CDC40YDR364C HOG1P32485 435 aa3.79□□□□□ -1.8
CDC40YDR364C EXO84P38261 753 aa3.79□□□□□ -1.8
CDC40YDR364C PCM1P38628 557 aaKnown RBP3.79□□□□□ -1.8
CDC40YDR364C TDA3P38758 523 aa3.79□□□□□ -1.8
CDC40YDR364C RPN10P38886 268 aaKnown RBP3.79□□□□□ -1.8
CDC40YDR364C IES1P43579 692 aa3.79□□□□□ -1.8
CDC40YDR364C NIT2P47016 307 aa3.79□□□□□ -1.8
CDC40YDR364C YGR283CP53336 341 aaPredicted RBP3.79□□□□□ -1.8
CDC40YDR364C VPS30Q02948 557 aa3.79□□□□□ -1.8
CDC40YDR364C COG8Q04632 607 aa3.79□□□□□ -1.8
CDC40YDR364C THI7Q05998 598 aa3.79□□□□□ -1.8
CDC40YDR364C SWI1P09547 1314 aa3.79□□□□□ -1.8
CDC40YDR364C INH1P01097 85 aa3.78□□□□□ -1.8
CDC40YDR364C HMG1P12683 1054 aa3.78□□□□□ -1.8
CDC40YDR364C NPP1P25353 742 aa3.78□□□□□ -1.8
CDC40YDR364C SWC3P31376 625 aa3.78□□□□□ -1.8
CDC40YDR364C DBF20P32328 564 aa3.78□□□□□ -1.8
CDC40YDR364C MCD4P36051 919 aa3.78□□□□□ -1.8
CDC40YDR364C BIT2P38346 545 aa3.78□□□□□ -1.8
CDC40YDR364C PCL5P38794 229 aa3.78□□□□□ -1.8
CDC40YDR364C GPP2P40106 250 aaKnown RBP3.78□□□□□ -1.8
CDC40YDR364C RSC8P43609 557 aaKnown RBP3.78□□□□□ -1.8
CDC40YDR364C MNN11P46985 422 aaKnown RBP3.78□□□□□ -1.8
CDC40YDR364C ESF2P53743 316 aaKnown RBP3.78□□□□□ -1.8
CDC40YDR364C PKH1Q03407 766 aa3.78□□□□□ -1.8
CDC40YDR364C BUL2Q03758 920 aaKnown RBP3.78□□□□□ -1.8
CDC40YDR364C ATG33Q06485 197 aa3.78□□□□□ -1.8
CDC40YDR364C MPH2P0CD99 609 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms