RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W PRP42Q03776 544 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W SGD1Q06132 899 aa1.51□□□□□ -2.17
MSN5YDR335W SPH1Q06160 661 aa1.51□□□□□ -2.17
MSN5YDR335W SKG3Q06315 1026 aa1.51□□□□□ -2.17
MSN5YDR335W RSC58Q07979 502 aa1.51□□□□□ -2.17
MSN5YDR335W MED7Q08278 222 aa1.51□□□□□ -2.17
MSN5YDR335W YOR223WQ12015 292 aa1.51□□□□□ -2.17
MSN5YDR335W YOR022CQ12204 715 aa1.51□□□□□ -2.17
MSN5YDR335W YRF1-4O13559 1382 aa1.51□□□□□ -2.17
MSN5YDR335W PCK1P10963 549 aa1.51□□□□□ -2.17
MSN5YDR335W GLN4P13188 809 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W POL3P15436 1097 aa1.51□□□□□ -2.17
MSN5YDR335W SRV2P17555 526 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W SWI4P25302 1093 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W YCL002CP25565 263 aa1.51□□□□□ -2.17
MSN5YDR335W IMG2P25642 146 aaPredicted RBP1.51□□□□□ -2.17
MSN5YDR335W REC104P33323 182 aa1.51□□□□□ -2.17
MSN5YDR335W ADD66P36040 267 aa1.51□□□□□ -2.17
MSN5YDR335W AXL2P38928 823 aa1.51□□□□□ -2.17
MSN5YDR335W MAF1P41910 395 aa1.51□□□□□ -2.17
MSN5YDR335W DUG1P43616 481 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W RMD8P43620 662 aa1.51□□□□□ -2.17
MSN5YDR335W LCL3P53153 274 aa1.51□□□□□ -2.17
MSN5YDR335W MNP1P53163 194 aaPredicted RBP1.51□□□□□ -2.17
MSN5YDR335W SQS1P53866 767 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W UTP5Q04177 643 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W RPN7Q06103 429 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W OPY2Q06810 360 aa1.51□□□□□ -2.17
MSN5YDR335W PUF3Q07807 879 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
MSN5YDR335W PEX15Q08215 383 aa1.51□□□□□ -2.17
MSN5YDR335W SPP41P38904 1435 aa1.51□□□□□ -2.17
MSN5YDR335W CAT8P39113 1433 aa1.5□□□□□ -2.17
MSN5YDR335W ACE2P21192 770 aa1.5□□□□□ -2.17
MSN5YDR335W CBP3P21560 335 aa1.5□□□□□ -2.17
MSN5YDR335W PRE8P23639 250 aa1.5□□□□□ -2.17
MSN5YDR335W SWC3P31376 625 aa1.5□□□□□ -2.17
MSN5YDR335W HOG1P32485 435 aa1.5□□□□□ -2.17
MSN5YDR335W PAH1P32567 862 aa1.5□□□□□ -2.17
MSN5YDR335W PCM1P38628 557 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W YHR033WP38690 423 aa1.5□□□□□ -2.17
MSN5YDR335W YHR202WP38887 602 aa1.5□□□□□ -2.17
MSN5YDR335W RTS1P38903 757 aa1.5□□□□□ -2.17
MSN5YDR335W YIL166CP40445 542 aa1.5□□□□□ -2.17
MSN5YDR335W MDE1P47095 244 aa1.5□□□□□ -2.17
MSN5YDR335W HNT2P49775 206 aa1.5□□□□□ -2.17
MSN5YDR335W CPR6P53691 371 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W ECM9Q02202 377 aa1.5□□□□□ -2.17
MSN5YDR335W RMT2Q03305 412 aa1.5□□□□□ -2.17
MSN5YDR335W MSH6Q03834 1242 aa1.5□□□□□ -2.17
MSN5YDR335W YLL054CQ12244 843 aa1.5□□□□□ -2.17
MSN5YDR335W PFK27Q12471 397 aaPredicted RBP1.5□□□□□ -2.17
MSN5YDR335W YIL177CP40434 1758 aa1.5□□□□□ -2.17
MSN5YDR335W YJL225CP40889 1758 aa1.5□□□□□ -2.17
MSN5YDR335W SEC53P07283 254 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W LOT5P34234 306 aa1.5□□□□□ -2.17
MSN5YDR335W LAS1P36146 502 aaPredicted RBP1.5□□□□□ -2.17
MSN5YDR335W PTC7P38797 343 aa1.5□□□□□ -2.17
MSN5YDR335W NPP2P39997 493 aa1.5□□□□□ -2.17
MSN5YDR335W MGS1P40151 587 aa1.5□□□□□ -2.17
MSN5YDR335W CIT3P43635 486 aa1.5□□□□□ -2.17
MSN5YDR335W POL31P46957 487 aa1.5□□□□□ -2.17
MSN5YDR335W ENT3P47160 408 aa1.5□□□□□ -2.17
MSN5YDR335W PSP1P50896 841 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W GUP1P53154 560 aa1.5□□□□□ -2.17
MSN5YDR335W ENV11P53246 860 aa1.5□□□□□ -2.17
MSN5YDR335W DAM1P53267 343 aa1.5□□□□□ -2.17
MSN5YDR335W LRS4Q04087 347 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W GPB1Q08886 897 aa1.5□□□□□ -2.17
MSN5YDR335W APL5Q08951 932 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W PLP2Q12017 286 aa1.5□□□□□ -2.17
MSN5YDR335W CFT2Q12102 859 aaPredicted RBP1.5□□□□□ -2.17
MSN5YDR335W MDY2Q12285 212 aa1.5□□□□□ -2.17
MSN5YDR335W PHO5P00635 467 aa1.5□□□□□ -2.17
MSN5YDR335W ARG3P05150 338 aa1.5□□□□□ -2.17
MSN5YDR335W MIS1P09440 975 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W PRP2P20095 876 aaPredicted RBP1.5□□□□□ -2.17
MSN5YDR335W ADP1P25371 1049 aa1.5□□□□□ -2.17
MSN5YDR335W TFB1P32776 642 aa1.5□□□□□ -2.17
MSN5YDR335W STB6P36085 766 aa1.5□□□□□ -2.17
MSN5YDR335W RDH54P38086 958 aa1.5□□□□□ -2.17
MSN5YDR335W ARL1P38116 183 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W SIP5P40210 489 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W YJL068CP40363 299 aa1.5□□□□□ -2.17
MSN5YDR335W MMM1P41800 426 aa1.5□□□□□ -2.17
MSN5YDR335W ZAP1P47043 880 aa1.5□□□□□ -2.17
MSN5YDR335W SGM1P47166 707 aa1.5□□□□□ -2.17
MSN5YDR335W LCD1Q04377 747 aa1.5□□□□□ -2.17
MSN5YDR335W GSF2Q04697 403 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W SNO4Q04902 237 aa1.5□□□□□ -2.17
MSN5YDR335W STP4Q07351 490 aa1.5□□□□□ -2.17
MSN5YDR335W SGO1Q08490 590 aa1.5□□□□□ -2.17
MSN5YDR335W SOG2Q08817 791 aa1.5□□□□□ -2.17
MSN5YDR335W HSP33Q08914 237 aaKnown RBP1.5□□□□□ -2.17
MSN5YDR335W HSP32Q08992 237 aa1.5□□□□□ -2.17
MSN5YDR335W ARP7Q12406 477 aa1.5□□□□□ -2.17
MSN5YDR335W YLR358CO13565 187 aa1.49□□□□□ -2.17
MSN5YDR335W NOT3P06102 836 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W GAL7P08431 366 aa1.49□□□□□ -2.17
MSN5YDR335W MSS18P08593 268 aa1.49□□□□□ -2.17
MSN5YDR335W SUI3P09064 285 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms