RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-222ENST00000641587 BRI3BPQ8WY22 251 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 ARMC5Q96C12 935 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 TEPSINQ96N21 525 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 PUS3Q9BZE2 481 aaKnown RBP12.67□□□□□ -0.38
PHGDH-222ENST00000641587 TMEM39BQ9GZU3 492 aa12.67□□□□□ -0.38
PHGDH-222ENST00000641587 TTF2Q9UNY4 1162 aaKnown RBP12.67□□□□□ -0.38
PHGDH-222ENST00000641587 FAM205AQ6ZU69 1335 aa12.66□□□□□ -0.38
PHGDH-222ENST00000641587 GRM8O00222 908 aa12.66□□□□□ -0.38
PHGDH-222ENST00000641587 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-222ENST00000641587 VGLL4Q14135 290 aa12.66□□□□□ -0.38
PHGDH-222ENST00000641587 CCDC57Q2TAC2 916 aa12.66□□□□□ -0.38
PHGDH-222ENST00000641587 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
PHGDH-222ENST00000641587 FAM43AQ8N2R8 423 aa12.66□□□□□ -0.38
PHGDH-222ENST00000641587 TDRD7Q8NHU6 1098 aaKnown RBP12.66□□□□□ -0.38
PHGDH-222ENST00000641587 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
PHGDH-222ENST00000641587 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-222ENST00000641587 IQSEC3Q9UPP2 1182 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-222ENST00000641587 PTCH2Q9Y6C5 1203 aa12.66□□□□□ -0.38
PHGDH-222ENST00000641587 CCL15-CCL14A0A0B4J2E2 113 aa12.65□□□□□ -0.38
PHGDH-222ENST00000641587 UNCXA6NJT0 531 aa12.65□□□□□ -0.38
PHGDH-222ENST00000641587 CACNB3P54284 484 aa12.65□□□□□ -0.38
PHGDH-222ENST00000641587 CCL15Q16663 113 aa12.65□□□□□ -0.38
PHGDH-222ENST00000641587 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
PHGDH-222ENST00000641587 OTUD7BQ6GQQ9 843 aa12.65□□□□□ -0.38
PHGDH-222ENST00000641587 DZIP1LQ8IYY4 767 aaKnown RBP12.65□□□□□ -0.38
PHGDH-222ENST00000641587 ZNF333Q96JL9 665 aa12.65□□□□□ -0.38
PHGDH-222ENST00000641587 FAM84BQ96KN1 310 aaPredicted RBP12.65□□□□□ -0.38
PHGDH-222ENST00000641587 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-222ENST00000641587 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
PHGDH-222ENST00000641587 CRKP46108 304 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 TNFAIP1Q13829 316 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-222ENST00000641587 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
PHGDH-222ENST00000641587 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 KAZALD1Q96I82 304 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
PHGDH-222ENST00000641587 SZT2Q5T011 3432 aa12.63□□□□□ -0.39
PHGDH-222ENST00000641587 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-222ENST00000641587 UBE4AQ14139 1066 aa12.63□□□□□ -0.39
PHGDH-222ENST00000641587 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
PHGDH-222ENST00000641587 WDR63Q8IWG1 891 aa12.63□□□□□ -0.39
PHGDH-222ENST00000641587 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
PHGDH-222ENST00000641587 E9PSI1 815 aa12.62□□□□□ -0.39
PHGDH-222ENST00000641587 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
PHGDH-222ENST00000641587 MAP3K9P80192 1104 aa12.62□□□□□ -0.39
PHGDH-222ENST00000641587 SLC9C1Q4G0N8 1177 aa12.62□□□□□ -0.39
PHGDH-222ENST00000641587 SH3TC2Q8TF17 1288 aa12.62□□□□□ -0.39
PHGDH-222ENST00000641587 ZFYVE28Q9HCC9 887 aa12.62□□□□□ -0.39
PHGDH-222ENST00000641587 C9orf78Q9NZ63 289 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-222ENST00000641587 SNCAIPQ9Y6H5 919 aa12.62□□□□□ -0.39
PHGDH-222ENST00000641587 NBPF7P0C2Y1 421 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-222ENST00000641587 GTF2A2P52657 109 aa12.61□□□□□ -0.39
PHGDH-222ENST00000641587 LRRC24Q50LG9 513 aa12.61□□□□□ -0.39
PHGDH-222ENST00000641587 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
PHGDH-222ENST00000641587 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
PHGDH-222ENST00000641587 CSADQ9Y600 493 aa12.61□□□□□ -0.39
PHGDH-222ENST00000641587 SPDYE5A6NIY4 337 aa12.6□□□□□ -0.39
PHGDH-222ENST00000641587 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
PHGDH-222ENST00000641587 TNNI2P48788 182 aa12.6□□□□□ -0.39
PHGDH-222ENST00000641587 SLC4A8Q2Y0W8 1093 aa12.6□□□□□ -0.39
PHGDH-222ENST00000641587 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
PHGDH-222ENST00000641587 KLHDC4Q8TBB5 520 aa12.6□□□□□ -0.39
PHGDH-222ENST00000641587 ZKSCAN4Q969J2 545 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-222ENST00000641587 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
PHGDH-222ENST00000641587 BICC1Q9H694 974 aaKnown RBP12.6□□□□□ -0.39
PHGDH-222ENST00000641587 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-222ENST00000641587 IRF6O14896 467 aa12.59□□□□□ -0.39
PHGDH-222ENST00000641587 ALDH1L1O75891 902 aa12.59□□□□□ -0.39
PHGDH-222ENST00000641587 SLFN5Q08AF3 891 aa12.59□□□□□ -0.39
PHGDH-222ENST00000641587 VPS37DQ86XT2 251 aa12.59□□□□□ -0.39
PHGDH-222ENST00000641587 SRCIN1Q9C0H9 1055 aa12.59□□□□□ -0.39
PHGDH-222ENST00000641587 MYH13Q9UKX3 1938 aa12.58□□□□□ -0.39
PHGDH-222ENST00000641587 TLR2O60603 784 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-222ENST00000641587 CTGFP29279 349 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 BCAMP50895 628 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 LACTBP83111 547 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-222ENST00000641587 METTL24Q5JXM2 366 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 NBPF11Q86T75 865 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 VGLL2Q8N8G2 317 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 TEKT1Q969V4 418 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 MROH5Q6ZUA9 1318 aa12.58□□□□□ -0.4
PHGDH-222ENST00000641587 RANBP2P49792 3224 aaKnown RBP12.58□□□□□ -0.4
PHGDH-222ENST00000641587 TRIOBPQ9H2D6 2365 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 INPP5BP32019 993 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 MTFR1Q15390 333 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 APOBEC3HQ6NTF7 200 aaKnown RBP12.57□□□□□ -0.4
PHGDH-222ENST00000641587 MIGA2Q7L4E1 593 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 ERO1BQ86YB8 467 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 CEP290O15078 2479 aa12.57□□□□□ -0.4
PHGDH-222ENST00000641587 H0YGN5 161 aa12.56□□□□□ -0.4
PHGDH-222ENST00000641587 CETPP11597 493 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms