RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 GJA5P36382 358 aa18.35■□□□□ 0.53
SRRT-219ENST00000641476 CAP1Q01518 475 aa18.35■□□□□ 0.53
SRRT-219ENST00000641476 LRRC24Q50LG9 513 aa18.35■□□□□ 0.53
SRRT-219ENST00000641476 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
SRRT-219ENST00000641476 TDRD7Q8NHU6 1098 aaKnown RBP18.35■□□□□ 0.53
SRRT-219ENST00000641476 USP44Q9H0E7 712 aa18.35■□□□□ 0.53
SRRT-219ENST00000641476 PPP2R3BQ9Y5P8 575 aa18.35■□□□□ 0.53
SRRT-219ENST00000641476 MYH13Q9UKX3 1938 aa18.35■□□□□ 0.53
SRRT-219ENST00000641476 LAMB1P07942 1786 aa18.35■□□□□ 0.53
SRRT-219ENST00000641476 OTOFQ9HC10 1997 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 CCER2I3L3R5 266 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 HIBADHP31937 336 aaKnown RBP18.34■□□□□ 0.53
SRRT-219ENST00000641476 IREB2P48200 963 aaKnown RBP18.34■□□□□ 0.53
SRRT-219ENST00000641476 SUPT20HL1Q3ZLR7 823 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 METTL24Q5JXM2 366 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 MFSD14BQ5SR56 506 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 VGLL2Q8N8G2 317 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 ZNF333Q96JL9 665 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 FAM84BQ96KN1 310 aaPredicted RBP18.34■□□□□ 0.53
SRRT-219ENST00000641476 PTPN18Q99952 460 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 VEZTQ9HBM0 779 aa18.34■□□□□ 0.53
SRRT-219ENST00000641476 MYCP01106 439 aaPredicted RBP18.33■□□□□ 0.52
SRRT-219ENST00000641476 SLC9C1Q4G0N8 1177 aa18.33■□□□□ 0.52
SRRT-219ENST00000641476 KLHDC4Q8TBB5 520 aa18.33■□□□□ 0.52
SRRT-219ENST00000641476 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
SRRT-219ENST00000641476 MYO1BO43795 1136 aa18.32■□□□□ 0.52
SRRT-219ENST00000641476 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
SRRT-219ENST00000641476 SLC4A8Q2Y0W8 1093 aa18.32■□□□□ 0.52
SRRT-219ENST00000641476 NBPF12Q5TAG4 269 aaPredicted RBP18.32■□□□□ 0.52
SRRT-219ENST00000641476 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
SRRT-219ENST00000641476 UNCXA6NJT0 531 aa18.31■□□□□ 0.52
SRRT-219ENST00000641476 ANKRD13AQ8IZ07 590 aa18.31■□□□□ 0.52
SRRT-219ENST00000641476 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
SRRT-219ENST00000641476 ELP3Q9H9T3 547 aa18.31■□□□□ 0.52
SRRT-219ENST00000641476 TTF2Q9UNY4 1162 aaKnown RBP18.31■□□□□ 0.52
SRRT-219ENST00000641476 KIAA0100Q14667 2235 aaKnown RBP18.3■□□□□ 0.52
SRRT-219ENST00000641476 H0YGN5 161 aa18.3■□□□□ 0.52
SRRT-219ENST00000641476 USP2O75604 605 aaPredicted RBP18.3■□□□□ 0.52
SRRT-219ENST00000641476 PDE8BO95263 885 aa18.3■□□□□ 0.52
SRRT-219ENST00000641476 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.52
SRRT-219ENST00000641476 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
SRRT-219ENST00000641476 NBPF11Q86T75 865 aa18.3■□□□□ 0.52
SRRT-219ENST00000641476 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
SRRT-219ENST00000641476 IQSEC3Q9UPP2 1182 aaPredicted RBP18.3■□□□□ 0.52
SRRT-219ENST00000641476 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
SRRT-219ENST00000641476 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
SRRT-219ENST00000641476 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
SRRT-219ENST00000641476 OPTNQ96CV9 577 aa18.29■□□□□ 0.52
SRRT-219ENST00000641476 SERPINA10Q9UK55 444 aa18.29■□□□□ 0.52
SRRT-219ENST00000641476 KIF16BQ96L93 1317 aa18.28■□□□□ 0.52
SRRT-219ENST00000641476 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
SRRT-219ENST00000641476 RASA3Q14644 834 aa18.28■□□□□ 0.52
SRRT-219ENST00000641476 PUM3Q15397 648 aaKnown RBP18.28■□□□□ 0.52
SRRT-219ENST00000641476 CAVIN4Q5BKX8 364 aa18.28■□□□□ 0.52
SRRT-219ENST00000641476 NOB1Q9ULX3 412 aaKnown RBP18.28■□□□□ 0.52
SRRT-219ENST00000641476 UBTFL1P0CB47 393 aaPredicted RBP18.27■□□□□ 0.52
SRRT-219ENST00000641476 FGFR2P21802 821 aa18.27■□□□□ 0.52
SRRT-219ENST00000641476 ARHGEF6Q15052 776 aa18.27■□□□□ 0.52
SRRT-219ENST00000641476 TAF1CQ15572 869 aaPredicted RBP18.27■□□□□ 0.52
SRRT-219ENST00000641476 GRIK5Q16478 980 aa18.27■□□□□ 0.52
SRRT-219ENST00000641476 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
SRRT-219ENST00000641476 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.52
SRRT-219ENST00000641476 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 EYA2O00167 538 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
SRRT-219ENST00000641476 CRKP46108 304 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 TNFAIP1Q13829 316 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 CCL15Q16663 113 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
SRRT-219ENST00000641476 SH3TC2Q8TF17 1288 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 TBC1D22AQ8WUA7 517 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 BRI3BPQ8WY22 251 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 MS4A4AQ96JQ5 239 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 ZFYVE28Q9HCC9 887 aa18.26■□□□□ 0.51
SRRT-219ENST00000641476 ZNF70Q9UC06 446 aaPredicted RBP18.26■□□□□ 0.51
SRRT-219ENST00000641476 IFIT1P09914 478 aaKnown RBP18.25■□□□□ 0.51
SRRT-219ENST00000641476 BCAMP50895 628 aa18.25■□□□□ 0.51
SRRT-219ENST00000641476 RARSP54136 660 aaKnown RBP18.25■□□□□ 0.51
SRRT-219ENST00000641476 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
SRRT-219ENST00000641476 TDRD3Q9H7E2 651 aaKnown RBP18.25■□□□□ 0.51
SRRT-219ENST00000641476 SZT2Q5T011 3432 aa18.24■□□□□ 0.51
SRRT-219ENST00000641476 SLC5A1P13866 664 aa18.24■□□□□ 0.51
SRRT-219ENST00000641476 ATG9AQ7Z3C6 839 aa18.24■□□□□ 0.51
SRRT-219ENST00000641476 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
SRRT-219ENST00000641476 LRRFIP2Q9Y608 721 aaKnown RBP18.24■□□□□ 0.51
SRRT-219ENST00000641476 GTF2A2P52657 109 aa18.23■□□□□ 0.51
SRRT-219ENST00000641476 CDAN1Q8IWY9 1227 aa18.23■□□□□ 0.51
SRRT-219ENST00000641476 MEIS3Q99687 375 aa18.23■□□□□ 0.51
SRRT-219ENST00000641476 ARHGAP39Q9C0H5 1083 aa18.23■□□□□ 0.51
SRRT-219ENST00000641476 SIL1Q9H173 461 aa18.23■□□□□ 0.51
SRRT-219ENST00000641476 TRIOBPQ9H2D6 2365 aa18.22■□□□□ 0.51
SRRT-219ENST00000641476 CIAO1O76071 339 aa18.22■□□□□ 0.51
SRRT-219ENST00000641476 HDLBPQ00341 1268 aaKnown RBP18.22■□□□□ 0.51
SRRT-219ENST00000641476 VGLL4Q14135 290 aa18.22■□□□□ 0.51
SRRT-219ENST00000641476 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.22■□□□□ 0.51
SRRT-219ENST00000641476 LPIN2Q92539 896 aa18.22■□□□□ 0.51
SRRT-219ENST00000641476 TEKT1Q969V4 418 aa18.22■□□□□ 0.51
SRRT-219ENST00000641476 TEPSINQ96N21 525 aa18.22■□□□□ 0.51
SRRT-219ENST00000641476 MAST3O60307 1309 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms