RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SERPINC1P01008 464 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 SFPQP23246 707 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCARB2-221ENST00000640341 MCAMP43121 646 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 CCZ1BP86790 482 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
SCARB2-221ENST00000640341 ZKSCAN3Q9BRR0 538 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 ZSCAN20P17040 1043 aaPredicted RBP16.92■□□□□ 0.3
SCARB2-221ENST00000640341 ITGA6P23229 1130 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 SARM1Q6SZW1 724 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 CMTR1Q8N1G2 835 aaKnown RBP16.92■□□□□ 0.3
SCARB2-221ENST00000640341 ANKRD7Q92527 254 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 TMOD3Q9NYL9 352 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
SCARB2-221ENST00000640341 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 ELF2Q15723 593 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 SYT10Q6XYQ8 523 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 SYKP43405 635 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 TPM4P67936 248 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 PNOCQ13519 176 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 MB21D2Q8IYB1 491 aaPredicted RBP16.92■□□□□ 0.3
SCARB2-221ENST00000640341 PRDM4Q9UKN5 801 aa16.92■□□□□ 0.3
SCARB2-221ENST00000640341 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 RFX7Q2KHR2 1363 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 HLFQ16534 295 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 TBC1D10CQ8IV04 446 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 CCAR2Q8N163 923 aaKnown RBP16.91■□□□□ 0.3
SCARB2-221ENST00000640341 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
SCARB2-221ENST00000640341 CYB5R4Q7L1T6 521 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 KIF18AQ8NI77 898 aa16.91■□□□□ 0.3
SCARB2-221ENST00000640341 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.91■□□□□ 0.3
SCARB2-221ENST00000640341 CDC25BP30305 580 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 TRIM29Q14134 588 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 PDILTQ8N807 584 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 SLC26A6Q9BXS9 759 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 TRMT112Q9UI30 125 aaKnown RBP16.9■□□□□ 0.3
SCARB2-221ENST00000640341 TBC1D2BQ9UPU7 963 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 MROH7-TTC4A0A0A0MT08 1334 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 CTDSPL2Q05D32 466 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 KRT40Q6A162 431 aa16.9■□□□□ 0.3
SCARB2-221ENST00000640341 MRC1P22897 1456 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-221ENST00000640341 CDC27P30260 824 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 ATL3Q6DD88 541 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-221ENST00000640341 ZNF532Q9HCE3 1301 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 NEMFO60524 1076 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 IL2RBP14784 551 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 PHKA1P46020 1223 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 ANGEL1Q9UNK9 670 aaKnown RBP16.89■□□□□ 0.29
SCARB2-221ENST00000640341 CIAO1O76071 339 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 ARMCX5Q6P1M9 558 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
SCARB2-221ENST00000640341 PIH1D3Q9NQM4 214 aaKnown RBP16.89■□□□□ 0.29
SCARB2-221ENST00000640341 WWC3Q9ULE0 1092 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
SCARB2-221ENST00000640341 AFDNP55196 1824 aaKnown RBP16.88■□□□□ 0.29
SCARB2-221ENST00000640341 GOLGA8AA7E2F4 631 aa16.88■□□□□ 0.29
SCARB2-221ENST00000640341 TMEM67Q5HYA8 995 aa16.88■□□□□ 0.29
SCARB2-221ENST00000640341 ZNF771Q7L3S4 317 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-221ENST00000640341 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
SCARB2-221ENST00000640341 YEATS4O95619 227 aa16.88■□□□□ 0.29
SCARB2-221ENST00000640341 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
SCARB2-221ENST00000640341 CHMP4CQ96CF2 233 aa16.88■□□□□ 0.29
SCARB2-221ENST00000640341 NRDCO43847 1150 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 FANCCQ00597 558 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 ZBTB9Q96C00 473 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 A0A1W2PQ27 194 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 A0A1W2PQ64 194 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
SCARB2-221ENST00000640341 ZBTB43O43298 467 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 UBASH3AP57075 661 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 GSDMDP57764 484 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 DPF2Q92785 391 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 KCNJ14Q9UNX9 436 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 FOXN1O15353 648 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 CNNM3Q8NE01 707 aa16.87■□□□□ 0.29
SCARB2-221ENST00000640341 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 NLRP12P59046 1061 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
SCARB2-221ENST00000640341 ZNF827Q17R98 1081 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 E4F1Q66K89 784 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-221ENST00000640341 DNAI1Q9UI46 699 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-221ENST00000640341 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 AXDND1Q5T1B0 1012 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-221ENST00000640341 APOA5Q6Q788 366 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 LRRN4CLQ8ND94 238 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
SCARB2-221ENST00000640341 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms