RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 MANSC4A6NHS7 340 aaPredicted RBP21.15■□□□□ 0.98
SMN2-216ENST00000638794 UNCXA6NJT0 531 aa21.15■□□□□ 0.98
SMN2-216ENST00000638794 USP2O75604 605 aaPredicted RBP21.15■□□□□ 0.98
SMN2-216ENST00000638794 SOX10P56693 466 aa21.15■□□□□ 0.98
SMN2-216ENST00000638794 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.97
SMN2-216ENST00000638794 BCAMP50895 628 aa21.14■□□□□ 0.97
SMN2-216ENST00000638794 IFNL1Q8IU54 200 aa21.14■□□□□ 0.97
SMN2-216ENST00000638794 CDAN1Q8IWY9 1227 aa21.14■□□□□ 0.97
SMN2-216ENST00000638794 TBC1D22AQ8WUA7 517 aa21.14■□□□□ 0.97
SMN2-216ENST00000638794 HPS5Q9UPZ3 1129 aa21.14■□□□□ 0.97
SMN2-216ENST00000638794 TCP10L2B9ZVM9 353 aa21.13■□□□□ 0.97
SMN2-216ENST00000638794 ALDH1A1P00352 501 aa21.13■□□□□ 0.97
SMN2-216ENST00000638794 RFX5P48382 616 aaPredicted RBP21.13■□□□□ 0.97
SMN2-216ENST00000638794 INHBEP58166 350 aa21.13■□□□□ 0.97
SMN2-216ENST00000638794 PUM3Q15397 648 aaKnown RBP21.13■□□□□ 0.97
SMN2-216ENST00000638794 PKN2Q16513 984 aaKnown RBP21.13■□□□□ 0.97
SMN2-216ENST00000638794 ANKRD13AQ8IZ07 590 aa21.13■□□□□ 0.97
SMN2-216ENST00000638794 TRMT2AQ8IZ69 625 aaKnown RBP21.13■□□□□ 0.97
SMN2-216ENST00000638794 TEPSINQ96N21 525 aa21.13■□□□□ 0.97
SMN2-216ENST00000638794 IGF2BP3O00425 579 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMN2-216ENST00000638794 FKTNO75072 461 aa21.12■□□□□ 0.97
SMN2-216ENST00000638794 FGFR2P21802 821 aa21.12■□□□□ 0.97
SMN2-216ENST00000638794 GJA5P36382 358 aa21.12■□□□□ 0.97
SMN2-216ENST00000638794 TMEM39BQ9GZU3 492 aa21.12■□□□□ 0.97
SMN2-216ENST00000638794 HTTP42858 3142 aa21.11■□□□□ 0.97
SMN2-216ENST00000638794 KIF16BQ96L93 1317 aa21.11■□□□□ 0.97
SMN2-216ENST00000638794 EYA2O00167 538 aa21.11■□□□□ 0.97
SMN2-216ENST00000638794 HDLBPQ00341 1268 aaKnown RBP21.11■□□□□ 0.97
SMN2-216ENST00000638794 TEKT1Q969V4 418 aa21.11■□□□□ 0.97
SMN2-216ENST00000638794 IFIT1P09914 478 aaKnown RBP21.1■□□□□ 0.97
SMN2-216ENST00000638794 TNNI2P48788 182 aa21.1■□□□□ 0.97
SMN2-216ENST00000638794 ELP3Q9H9T3 547 aa21.1■□□□□ 0.97
SMN2-216ENST00000638794 PDE4DIPQ5VU43 2346 aa21.1■□□□□ 0.97
SMN2-216ENST00000638794 CACNB3P54284 484 aa21.09■□□□□ 0.97
SMN2-216ENST00000638794 CENPFP49454 3210 aa21.09■□□□□ 0.97
SMN2-216ENST00000638794 CT47B1P0C2W7 299 aaPredicted RBP21.08■□□□□ 0.97
SMN2-216ENST00000638794 UBTFL1P0CB47 393 aaPredicted RBP21.08■□□□□ 0.97
SMN2-216ENST00000638794 SLC5A1P13866 664 aa21.08■□□□□ 0.97
SMN2-216ENST00000638794 FBXO46Q6PJ61 603 aaPredicted RBP21.08■□□□□ 0.97
SMN2-216ENST00000638794 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.08■□□□□ 0.97
SMN2-216ENST00000638794 ATG9AQ7Z3C6 839 aa21.08■□□□□ 0.97
SMN2-216ENST00000638794 LPIN2Q92539 896 aa21.08■□□□□ 0.97
SMN2-216ENST00000638794 OPTNQ96CV9 577 aa21.08■□□□□ 0.97
SMN2-216ENST00000638794 ZDHHC15Q96MV8 337 aa21.08■□□□□ 0.97
SMN2-216ENST00000638794 NOB1Q9ULX3 412 aaKnown RBP21.08■□□□□ 0.97
SMN2-216ENST00000638794 SIL1Q9H173 461 aa21.07■□□□□ 0.96
SMN2-216ENST00000638794 SUGT1Q9Y2Z0 365 aa21.07■□□□□ 0.96
SMN2-216ENST00000638794 MAST3O60307 1309 aa21.06■□□□□ 0.96
SMN2-216ENST00000638794 VGLL4Q14135 290 aa21.06■□□□□ 0.96
SMN2-216ENST00000638794 APOBEC3HQ6NTF7 200 aaKnown RBP21.06■□□□□ 0.96
SMN2-216ENST00000638794 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMN2-216ENST00000638794 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
SMN2-216ENST00000638794 PTPN18Q99952 460 aa21.06■□□□□ 0.96
SMN2-216ENST00000638794 MRIQ9BWK5 157 aa21.06■□□□□ 0.96
SMN2-216ENST00000638794 TESPA1A2RU30 521 aaPredicted RBP21.05■□□□□ 0.96
SMN2-216ENST00000638794 CRHR2Q13324 411 aa21.05■□□□□ 0.96
SMN2-216ENST00000638794 OTUD7BQ6GQQ9 843 aa21.05■□□□□ 0.96
SMN2-216ENST00000638794 API5Q9BZZ5 524 aaKnown RBP21.05■□□□□ 0.96
SMN2-216ENST00000638794 TMOD2Q9NZR1 351 aa21.05■□□□□ 0.96
SMN2-216ENST00000638794 LRRFIP2Q9Y608 721 aaKnown RBP21.05■□□□□ 0.96
SMN2-216ENST00000638794 MAP3K9P80192 1104 aa21.04■□□□□ 0.96
SMN2-216ENST00000638794 HHIPL2Q6UWX4 724 aa21.04■□□□□ 0.96
SMN2-216ENST00000638794 WDR66Q8TBY9 1149 aa21.04■□□□□ 0.96
SMN2-216ENST00000638794 MS4A4AQ96JQ5 239 aa21.04■□□□□ 0.96
SMN2-216ENST00000638794 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
SMN2-216ENST00000638794 CIAO1O76071 339 aa21.03■□□□□ 0.96
SMN2-216ENST00000638794 ATP2B3Q16720 1220 aa21.03■□□□□ 0.96
SMN2-216ENST00000638794 FKBP1CQ5VVH2 108 aa21.03■□□□□ 0.96
SMN2-216ENST00000638794 FAM83AQ86UY5 434 aa21.03■□□□□ 0.96
SMN2-216ENST00000638794 TRIM17Q9Y577 477 aa21.03■□□□□ 0.96
SMN2-216ENST00000638794 CSADQ9Y600 493 aa21.03■□□□□ 0.96
SMN2-216ENST00000638794 CCER2I3L3R5 266 aa21.02■□□□□ 0.96
SMN2-216ENST00000638794 OTOP1Q7RTM1 612 aa21.02■□□□□ 0.96
SMN2-216ENST00000638794 MEIS3Q99687 375 aa21.02■□□□□ 0.96
SMN2-216ENST00000638794 CEP126Q9P2H0 1117 aa21.02■□□□□ 0.96
SMN2-216ENST00000638794 PA2G4Q9UQ80 394 aaKnown RBP21.02■□□□□ 0.96
SMN2-216ENST00000638794 BRCA2P51587 3418 aa21.02■□□□□ 0.96
SMN2-216ENST00000638794 RPAP1Q9BWH6 1393 aaPredicted RBP21.01■□□□□ 0.95
SMN2-216ENST00000638794 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
SMN2-216ENST00000638794 BRI3BPQ8WY22 251 aa21.01■□□□□ 0.95
SMN2-216ENST00000638794 OTUD5Q96G74 571 aa21.01■□□□□ 0.95
SMN2-216ENST00000638794 CCL15-CCL14A0A0B4J2E2 113 aa21■□□□□ 0.95
SMN2-216ENST00000638794 IL15P40933 162 aaPredicted RBP21■□□□□ 0.95
SMN2-216ENST00000638794 GTF2A2P52657 109 aa21■□□□□ 0.95
SMN2-216ENST00000638794 DIXDC1Q155Q3 683 aa21■□□□□ 0.95
SMN2-216ENST00000638794 CCL15Q16663 113 aa21■□□□□ 0.95
SMN2-216ENST00000638794 CD99L2Q8TCZ2 262 aa21■□□□□ 0.95
SMN2-216ENST00000638794 ERO1AQ96HE7 468 aa21■□□□□ 0.95
SMN2-216ENST00000638794 WRNIP1Q96S55 665 aa21■□□□□ 0.95
SMN2-216ENST00000638794 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
SMN2-216ENST00000638794 DAGLAQ9Y4D2 1042 aa21■□□□□ 0.95
SMN2-216ENST00000638794 SNCAIPQ9Y6H5 919 aa21■□□□□ 0.95
SMN2-216ENST00000638794 SPDYE5A6NIY4 337 aa20.99■□□□□ 0.95
SMN2-216ENST00000638794 PRDX5P30044 214 aa20.99■□□□□ 0.95
SMN2-216ENST00000638794 COPRSQ9NQ92 184 aa20.99■□□□□ 0.95
SMN2-216ENST00000638794 GNL3LQ9NVN8 582 aaKnown RBP20.99■□□□□ 0.95
SMN2-216ENST00000638794 AK9Q5TCS8 1911 aa20.99■□□□□ 0.95
SMN2-216ENST00000638794 MKI67P46013 3256 aaKnown RBP20.98■□□□□ 0.95
SMN2-216ENST00000638794 PHKA1P46020 1223 aa20.98■□□□□ 0.95
SMN2-216ENST00000638794 SP3Q02447 781 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms