RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SLC5A1P13866 664 aa25.08■■□□□ 1.61
CLN6-222ENST00000637667 HDLBPQ00341 1268 aaKnown RBP25.08■■□□□ 1.61
CLN6-222ENST00000637667 LPIN2Q92539 896 aa25.08■■□□□ 1.61
CLN6-222ENST00000637667 CLMNQ96JQ2 1002 aa25.08■■□□□ 1.61
CLN6-222ENST00000637667 FBXO3Q9UK99 471 aa25.08■■□□□ 1.61
CLN6-222ENST00000637667 LRRFIP2Q9Y608 721 aaKnown RBP25.08■■□□□ 1.61
CLN6-222ENST00000637667 UNCXA6NJT0 531 aa25.07■■□□□ 1.6
CLN6-222ENST00000637667 TBC1D8O95759 1140 aa25.07■■□□□ 1.6
CLN6-222ENST00000637667 CIAO1O76071 339 aa25.06■■□□□ 1.6
CLN6-222ENST00000637667 IREB2P48200 963 aaKnown RBP25.06■■□□□ 1.6
CLN6-222ENST00000637667 ARHGAP45Q92619 1136 aa25.06■■□□□ 1.6
CLN6-222ENST00000637667 MEIS3Q99687 375 aa25.06■■□□□ 1.6
CLN6-222ENST00000637667 SIL1Q9H173 461 aa25.06■■□□□ 1.6
CLN6-222ENST00000637667 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.06■■□□□ 1.6
CLN6-222ENST00000637667 SUGT1Q9Y2Z0 365 aa25.06■■□□□ 1.6
CLN6-222ENST00000637667 ARAP2Q8WZ64 1704 aa25.06■■□□□ 1.6
CLN6-222ENST00000637667 TCP10L2B9ZVM9 353 aa25.05■■□□□ 1.6
CLN6-222ENST00000637667 USP2O75604 605 aaPredicted RBP25.05■■□□□ 1.6
CLN6-222ENST00000637667 CTU1Q7Z7A3 348 aaKnown RBP25.05■■□□□ 1.6
CLN6-222ENST00000637667 TEKT1Q969V4 418 aa25.05■■□□□ 1.6
CLN6-222ENST00000637667 WNK4Q96J92 1243 aa25.05■■□□□ 1.6
CLN6-222ENST00000637667 CEP126Q9P2H0 1117 aa25.05■■□□□ 1.6
CLN6-222ENST00000637667 MANSC4A6NHS7 340 aaPredicted RBP25.04■■□□□ 1.6
CLN6-222ENST00000637667 ZBTB48P10074 688 aaPredicted RBP25.04■■□□□ 1.6
CLN6-222ENST00000637667 TEPSINQ96N21 525 aa25.04■■□□□ 1.6
CLN6-222ENST00000637667 MRIQ9BWK5 157 aa25.04■■□□□ 1.6
CLN6-222ENST00000637667 TNNI2P48788 182 aa25.03■■□□□ 1.6
CLN6-222ENST00000637667 ATP2B3Q16720 1220 aa25.03■■□□□ 1.6
CLN6-222ENST00000637667 INTS3Q68E01 1043 aaKnown RBP25.03■■□□□ 1.6
CLN6-222ENST00000637667 CDAN1Q8IWY9 1227 aa25.03■■□□□ 1.6
CLN6-222ENST00000637667 ZNF296Q8WUU4 475 aaPredicted RBP25.03■■□□□ 1.6
CLN6-222ENST00000637667 ZDHHC15Q96MV8 337 aa25.03■■□□□ 1.6
CLN6-222ENST00000637667 MAST3O60307 1309 aa25.03■■□□□ 1.6
CLN6-222ENST00000637667 NOM1Q5C9Z4 860 aaKnown RBP25.02■■□□□ 1.6
CLN6-222ENST00000637667 ANKRD13AQ8IZ07 590 aa25.02■■□□□ 1.6
CLN6-222ENST00000637667 WDR66Q8TBY9 1149 aa25.02■■□□□ 1.6
CLN6-222ENST00000637667 CFHR5Q9BXR6 569 aa25.02■■□□□ 1.6
CLN6-222ENST00000637667 TMEM39BQ9GZU3 492 aa25.02■■□□□ 1.6
CLN6-222ENST00000637667 PA2G4Q9UQ80 394 aaKnown RBP25.02■■□□□ 1.6
CLN6-222ENST00000637667 GPR25O00155 361 aa25.01■■□□□ 1.59
CLN6-222ENST00000637667 IL15P40933 162 aaPredicted RBP25.01■■□□□ 1.59
CLN6-222ENST00000637667 INHBEP58166 350 aa25.01■■□□□ 1.59
CLN6-222ENST00000637667 ALDH1A1P00352 501 aa25■■□□□ 1.59
CLN6-222ENST00000637667 GNAI3P08754 354 aa25■■□□□ 1.59
CLN6-222ENST00000637667 CACNB3P54284 484 aa25■■□□□ 1.59
CLN6-222ENST00000637667 APOBEC3HQ6NTF7 200 aaKnown RBP25■■□□□ 1.59
CLN6-222ENST00000637667 COPRSQ9NQ92 184 aa25■■□□□ 1.59
CLN6-222ENST00000637667 IPO8O15397 1037 aaKnown RBP24.99■■□□□ 1.59
CLN6-222ENST00000637667 GJA5P36382 358 aa24.99■■□□□ 1.59
CLN6-222ENST00000637667 RGS19P49795 217 aa24.99■■□□□ 1.59
CLN6-222ENST00000637667 HHIPL2Q6UWX4 724 aa24.99■■□□□ 1.59
CLN6-222ENST00000637667 IFNL1Q8IU54 200 aa24.99■■□□□ 1.59
CLN6-222ENST00000637667 R3HDMLQ9H3Y0 253 aa24.99■■□□□ 1.59
CLN6-222ENST00000637667 GNL3LQ9NVN8 582 aaKnown RBP24.99■■□□□ 1.59
CLN6-222ENST00000637667 TMOD2Q9NZR1 351 aa24.99■■□□□ 1.59
CLN6-222ENST00000637667 FKBP1CQ5VVH2 108 aa24.98■■□□□ 1.59
CLN6-222ENST00000637667 TRIM27P14373 513 aa24.97■■□□□ 1.59
CLN6-222ENST00000637667 ELP3Q9H9T3 547 aa24.97■■□□□ 1.59
CLN6-222ENST00000637667 IGF2BP3O00425 579 aaKnown RBP eCLIP24.96■■□□□ 1.59
CLN6-222ENST00000637667 BCAR3O75815 825 aa24.96■■□□□ 1.59
CLN6-222ENST00000637667 ATF7IPQ6VMQ6 1270 aa24.96■■□□□ 1.59
CLN6-222ENST00000637667 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.96■■□□□ 1.59
CLN6-222ENST00000637667 FAM83AQ86UY5 434 aa24.96■■□□□ 1.59
CLN6-222ENST00000637667 SRGAP3O43295 1099 aa24.95■■□□□ 1.58
CLN6-222ENST00000637667 FKTNO75072 461 aa24.95■■□□□ 1.58
CLN6-222ENST00000637667 PHKA1P46020 1223 aa24.95■■□□□ 1.58
CLN6-222ENST00000637667 MAP3K9P80192 1104 aa24.95■■□□□ 1.58
CLN6-222ENST00000637667 MLLT1Q03111 559 aaPredicted RBP24.95■■□□□ 1.58
CLN6-222ENST00000637667 MTX1Q13505 466 aa24.95■■□□□ 1.58
CLN6-222ENST00000637667 PKN2Q16513 984 aaKnown RBP24.95■■□□□ 1.58
CLN6-222ENST00000637667 FRAT1Q92837 279 aaPredicted RBP24.95■■□□□ 1.58
CLN6-222ENST00000637667 OPTNQ96CV9 577 aa24.95■■□□□ 1.58
CLN6-222ENST00000637667 SEMA3EO15041 775 aa24.94■■□□□ 1.58
CLN6-222ENST00000637667 ADORA1P30542 326 aa24.94■■□□□ 1.58
CLN6-222ENST00000637667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.94■■□□□ 1.58
CLN6-222ENST00000637667 DENND2AQ9ULE3 1009 aa24.94■■□□□ 1.58
CLN6-222ENST00000637667 TNNQ9UQP3 1299 aa24.94■■□□□ 1.58
CLN6-222ENST00000637667 PRDX5P30044 214 aa24.93■■□□□ 1.58
CLN6-222ENST00000637667 VGLL4Q14135 290 aa24.93■■□□□ 1.58
CLN6-222ENST00000637667 OTUD7BQ6GQQ9 843 aa24.93■■□□□ 1.58
CLN6-222ENST00000637667 MIER1Q8N108 512 aa24.93■■□□□ 1.58
CLN6-222ENST00000637667 DAGLAQ9Y4D2 1042 aa24.93■■□□□ 1.58
CLN6-222ENST00000637667 CSADQ9Y600 493 aa24.93■■□□□ 1.58
CLN6-222ENST00000637667 SALL1Q9NSC2 1324 aa24.92■■□□□ 1.58
CLN6-222ENST00000637667 LDHBP07195 334 aaKnown RBP24.92■■□□□ 1.58
CLN6-222ENST00000637667 DIXDC1Q155Q3 683 aa24.92■■□□□ 1.58
CLN6-222ENST00000637667 CCDC102BQ68D86 513 aa24.92■■□□□ 1.58
CLN6-222ENST00000637667 HPS5Q9UPZ3 1129 aa24.92■■□□□ 1.58
CLN6-222ENST00000637667 TESPA1A2RU30 521 aaPredicted RBP24.91■■□□□ 1.58
CLN6-222ENST00000637667 ZBTB22O15209 634 aa24.91■■□□□ 1.58
CLN6-222ENST00000637667 HNRNPUQ00839 825 aaKnown RBP eCLIP24.91■■□□□ 1.58
CLN6-222ENST00000637667 CNKSR2Q8WXI2 1034 aa24.91■■□□□ 1.58
CLN6-222ENST00000637667 CLUAP1Q96AJ1 413 aa24.91■■□□□ 1.58
CLN6-222ENST00000637667 HOOK2Q96ED9 719 aa24.91■■□□□ 1.58
CLN6-222ENST00000637667 RPAP1Q9BWH6 1393 aaPredicted RBP24.91■■□□□ 1.58
CLN6-222ENST00000637667 GNAI2P04899 355 aa24.9■■□□□ 1.58
CLN6-222ENST00000637667 TIMM10P62072 90 aa24.9■■□□□ 1.58
CLN6-222ENST00000637667 CDC42EP5Q6NZY7 148 aa24.9■■□□□ 1.58
CLN6-222ENST00000637667 MS4A4AQ96JQ5 239 aa24.9■■□□□ 1.58
CLN6-222ENST00000637667 PTPN18Q99952 460 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms