RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ZNF574Q6ZN55 896 aaPredicted RBP5.76□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 CAPN12Q6ZSI9 719 aa5.76□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 ATG4DQ86TL0 474 aaPredicted RBP5.76□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 GATA6Q92908 595 aa5.76□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 NUDT16Q96DE0 195 aaKnown RBP5.76□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 SUGCTQ9HAC7 445 aa5.76□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 SEPT3Q9UH03 358 aa5.76□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 PDGFAP04085 211 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 CYP2E1P05181 493 aaPredicted RBP5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 DRD2P14416 443 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 EIF1AXP47813 144 aaKnown RBP5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 FKBP4Q02790 459 aaKnown RBP eCLIP5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 MESP2Q0VG99 397 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 FAM26DQ5JW98 314 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 HGSNATQ68CP4 663 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 ZNF438Q7Z4V0 828 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 SPRED2Q7Z698 418 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 NCAPG2Q86XI2 1143 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 WFDC3Q8IUB2 231 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 CILP2Q8IUL8 1156 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 GLIS3Q8NEA6 775 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 GTF3C2Q8WUA4 911 aaPredicted RBP5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 ELP3Q9H9T3 547 aa5.75□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 MPSTP25325 297 aa5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 BUD31P41223 144 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 ARL4DP49703 201 aa5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 C19orf57Q0VDD7 668 aa5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 SNX29Q8TEQ0 813 aa5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 EDEM1Q92611 657 aa5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 EZH1Q92800 747 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 FAM84AQ96KN4 292 aa5.74□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 ZBTB39O15060 712 aa5.73□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 C2CD4AQ8NCU7 369 aaPredicted RBP5.73□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 BHLHE22Q8NFJ8 381 aaPredicted RBP5.73□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 DLGAP3O95886 979 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 NEFLP07196 543 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 CFPP27918 469 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 CYP27A1Q02318 531 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 PHLDB3Q6NSJ2 640 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 ZNF765Q7L2R6 523 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 STK11IPQ8N1F8 1099 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 TOX2Q96NM4 488 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 YIPF2Q9BWQ6 316 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 USP26Q9BXU7 913 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 RC3H2Q9HBD1 1191 aaKnown RBP5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 SALL4Q9UJQ4 1053 aa5.72□□□□□ -1.49
NPHP3-ACAD11-202ENST00000632629 LOC100289279A0A1B0GTE1 492 aa5.71□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 EDN3P14138 238 aa5.71□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 DNM1Q05193 864 aaKnown RBP5.71□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 EXOSC6Q5RKV6 272 aaKnown RBP5.71□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 LCNL1Q6ZST4 164 aa5.71□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 CITED4Q96RK1 184 aa5.71□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 NFKBIEO00221 500 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 SOX1O00570 391 aaPredicted RBP5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ICMTO60725 284 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 RNASE1P07998 156 aaKnown RBP5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 CES1P23141 567 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 RAP1GAPP47736 663 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 SOX4Q06945 474 aaPredicted RBP5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 BNIP3Q12983 259 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 C1QL4Q86Z23 238 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 GJD3Q8N144 294 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TMEM63CQ9P1W3 806 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 SOX13Q9UN79 622 aa5.7□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 NFICP08651 508 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ACPPP15309 386 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 FUT4P22083 530 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 PDE3BQ13370 1112 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ATCAYQ86WG3 371 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TMEM102Q8N9M5 508 aaPredicted RBP5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ZSCAN18Q8TBC5 510 aaPredicted RBP5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 MBNL3Q9NUK0 354 aaKnown RBP5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 KANSL3Q9P2N6 904 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ADAMTS6Q9UKP5 1117 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 POLIQ9UNA4 740 aa5.69□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 LRRC10BA6NIK2 292 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 PDE2AO00408 941 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 FZD6O60353 706 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 PHACTR2O75167 634 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 AAMPQ13685 434 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 MAP7Q14244 749 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 C8orf34Q49A92 452 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 GGNBP2Q9H3C7 697 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 DZANK1Q9NVP4 752 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 AMOTL2Q9Y2J4 779 aa5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 NDUFB5O43674 189 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TNFRSF21O75509 655 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TRPA1O75762 1119 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 CD8BP10966 210 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 IKBKEQ14164 716 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TTLL10Q6ZVT0 673 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 SIAH1Q8IUQ4 282 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 GLYCTKQ8IVS8 523 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 LRRC56Q8IYG6 542 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 LRRN4CLQ8ND94 238 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 MISP3Q96FF7 219 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 HHIPQ96QV1 700 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 CHRDQ9H2X0 955 aa5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 SOX17Q9H6I2 414 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms