RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ATP5J2-PTCD1G3V325 749 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 HTATSF1O43719 755 aaKnown RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 HUNKP57058 714 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 SWT1Q5T5J6 900 aaKnown RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 USP48Q86UV5 1035 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 TRPM4Q8TD43 1214 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 CCDC85AQ96PX6 553 aaPredicted RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 ADARB2Q9NS39 739 aaKnown RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 ZNRF3Q9ULT6 936 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 CASP8AP2Q9UKL3 1982 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 UBR2Q8IWV8 1755 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 DLEC1Q9Y238 1755 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 ABCC4O15439 1325 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 NPC1L1Q9UHC9 1359 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 DKK1O94907 266 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 USP50Q70EL3 339 aaPredicted RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 SAMD7Q7Z3H4 446 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 FAM174AQ8TBP5 190 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 CRAMP1Q96RY5 1269 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 CNOT7Q9UIV1 285 aaKnown RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 RBM19Q9Y4C8 960 aaKnown RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 H7C1D1 291 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 HOXA10P31260 410 aaPredicted RBP6.18□□□□□ -1.42
LINC00550-201ENST00000629293 DOK7Q18PE1 504 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 PARP10Q53GL7 1025 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 ZNF34Q8IZ26 560 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 FAM89AQ96GI7 184 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 ZIC5Q96T25 663 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 ATP6V0A2Q9Y487 856 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 DICER1Q9UPY3 1922 aaKnown RBP6.18□□□□□ -1.42
LINC00550-201ENST00000629293 FBXO45P0C2W1 286 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 MLLT1Q03111 559 aaPredicted RBP6.18□□□□□ -1.42
LINC00550-201ENST00000629293 DGKZQ13574 1117 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 SAPCD2Q86UD0 394 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 PACS2Q86VP3 889 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 SCAF8Q9UPN6 1271 aaKnown RBP6.18□□□□□ -1.42
LINC00550-201ENST00000629293 ELL2O00472 640 aaPredicted RBP6.18□□□□□ -1.42
LINC00550-201ENST00000629293 KRT26Q7Z3Y9 468 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 KIAA1468Q9P260 1216 aa6.18□□□□□ -1.42
LINC00550-201ENST00000629293 COL4A5P29400 1685 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 HIRAP54198 1017 aaPredicted RBP6.17□□□□□ -1.42
LINC00550-201ENST00000629293 TNIP1Q15025 636 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 CRTC2Q53ET0 693 aaPredicted RBP6.17□□□□□ -1.42
LINC00550-201ENST00000629293 HELBQ8NG08 1087 aaPredicted RBP6.17□□□□□ -1.42
LINC00550-201ENST00000629293 JARID2Q92833 1246 aaPredicted RBP6.17□□□□□ -1.42
LINC00550-201ENST00000629293 TLL2Q9Y6L7 1015 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 SH3TC1Q8TE82 1336 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 NLRP10Q86W26 655 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 PLEKHM2Q8IWE5 1019 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 SUPT20HQ8NEM7 779 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 MCOLN1Q9GZU1 580 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 KCNQ5Q9NR82 932 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 CHPF2Q9P2E5 772 aa6.17□□□□□ -1.42
LINC00550-201ENST00000629293 PSMD14O00487 310 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 TRPA1O75762 1119 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 BBOX1O75936 387 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 EGFRP00533 1210 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 F12P00748 615 aaPredicted RBP6.16□□□□□ -1.42
LINC00550-201ENST00000629293 DESI1Q6ICB0 168 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 SCN4AP35499 1836 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 ADM5C9JUS6 153 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 SOX10P56693 466 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 KIAA2012Q0VF49 1180 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 CELF1Q92879 486 aaKnown RBP6.16□□□□□ -1.42
LINC00550-201ENST00000629293 PNNQ9H307 717 aaKnown RBP6.16□□□□□ -1.42
LINC00550-201ENST00000629293 ANKIB1Q9P2G1 1089 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 YDJCA8MPS7 323 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 ZNF157P51786 506 aaPredicted RBP6.16□□□□□ -1.42
LINC00550-201ENST00000629293 GRAPQ13588 217 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 HSP90AB3PQ58FF7 597 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 PHTF2Q8N3S3 785 aa6.16□□□□□ -1.42
LINC00550-201ENST00000629293 GRAPLQ8TC17 118 aaPredicted RBP6.16□□□□□ -1.42
LINC00550-201ENST00000629293 DCPSQ96C86 337 aaKnown RBP6.16□□□□□ -1.42
LINC00550-201ENST00000629293 MAP2K2P36507 400 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 TCIRG1Q13488 830 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 GRIPAP1Q4V328 841 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 SP8Q8IXZ3 490 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 PLEKHF1Q96S99 279 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 TRIOBPQ9H2D6 2365 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 TMPOP42166 694 aaKnown RBP6.15□□□□□ -1.42
LINC00550-201ENST00000629293 PTK7Q13308 1070 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 WDR43Q15061 677 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC00550-201ENST00000629293 C2orf69Q8N8R5 385 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 GGA3Q9NZ52 723 aa6.15□□□□□ -1.42
LINC00550-201ENST00000629293 MKI67P46013 3256 aaKnown RBP6.15□□□□□ -1.43
LINC00550-201ENST00000629293 NOGQ13253 232 aa6.15□□□□□ -1.43
LINC00550-201ENST00000629293 PRAMEF18Q5VWM3 479 aa6.15□□□□□ -1.43
LINC00550-201ENST00000629293 ANKRD13DQ6ZTN6 518 aa6.15□□□□□ -1.43
LINC00550-201ENST00000629293 ZC3H12CQ9C0D7 883 aaKnown RBP6.15□□□□□ -1.43
LINC00550-201ENST00000629293 GBA2Q9HCG7 927 aaPredicted RBP6.15□□□□□ -1.43
LINC00550-201ENST00000629293 SIPA1L3O60292 1781 aaPredicted RBP6.14□□□□□ -1.43
LINC00550-201ENST00000629293 CENPFP49454 3210 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 ASTN2O75129 1339 aaPredicted RBP6.14□□□□□ -1.43
LINC00550-201ENST00000629293 FANCIQ9NVI1 1328 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L3A6NCW0 530 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 USP17L4A6NCW7 530 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 ECE2O60344 883 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 UFL1O94874 794 aa6.14□□□□□ -1.43
LINC00550-201ENST00000629293 SCNN1AP37088 669 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms