RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 PICK1Q9NRD5 415 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 AKAP2Q9Y2D5 859 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 NLRP1Q9C000 1473 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 SYNMO15061 1565 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 LAMC1P11047 1609 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 SEC24BO95487 1268 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 KRT18P05783 430 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 PRIM1P49642 420 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 BLVRAP53004 296 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 PSME1Q06323 249 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 FAPQ12884 760 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 PDAP1Q13442 181 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 KBTBD12Q3ZCT8 623 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 ATP11CQ8NB49 1132 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC191Q8NCU4 936 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 ERP27Q96DN0 273 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 SPATA17Q96L03 361 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 TBK1Q9UHD2 729 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 BLOC1S6Q9UL45 172 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 LZTS1Q9Y250 596 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 ATP8A1Q9Y2Q0 1164 aa4.44□□□□□ -1.7
R3HDM1-220ENST00000628915 MLH3Q9UHC1 1453 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 KIAA1107Q9UPP5 1409 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 ANKRD30AQ9BXX3 1397 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 RBP3P10745 1247 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 MAN1A1P33908 653 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 EIF5P55010 431 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 SFSWAPQ12872 951 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 PARP10Q53GL7 1025 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 CLEC17AQ6ZS10 378 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 ILDR1Q86SU0 546 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC26Q8TAB7 109 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 PIBF1Q8WXW3 757 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 PPM1EQ8WY54 764 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 CDCA7LQ96GN5 454 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 RABEP2Q9H5N1 569 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 USTQ9Y2C2 406 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 VWDEQ8N2E2 1590 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 ARPC4-TTLL3A0A0A6YYG9 625 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 IMPDH2P12268 514 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 ZBED6P86452 979 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 PDE4DQ08499 809 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 SMC1AQ14683 1233 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 KIAA0753Q2KHM9 967 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 MUM1Q2TAK8 710 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 C20orf194Q5TEA3 1177 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 ANO1Q5XXA6 986 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 TMCO3Q6UWJ1 677 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 KSR2Q6VAB6 950 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 ZFPM2Q8WW38 1151 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 IL17RAQ96F46 866 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 CAPS2Q9BXY5 557 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 RPAP3Q9H6T3 665 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 BCL2L12Q9HB09 334 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 METRNQ9UJH8 293 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 TTLL13PA6NNM8 815 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 TMOD1P28289 359 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 PDE3AQ14432 1141 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 KANK3Q6NY19 840 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 TNIP2Q8NFZ5 429 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 CERKQ8TCT0 537 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 ANKRD7Q92527 254 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 GSDMAQ96QA5 445 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 TACO1Q9BSH4 297 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 COG6Q9Y2V7 657 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 MAGED1Q9Y5V3 778 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 NCOA3Q9Y6Q9 1424 aa4.43□□□□□ -1.7
R3HDM1-220ENST00000628915 HPDP32754 393 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 ATN1P54259 1190 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TPM4P67936 248 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SF3B3Q15393 1217 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TERF2Q15554 542 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 ZNF449Q6P9G9 518 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CHPFQ8IZ52 775 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 LARGE2Q8N3Y3 721 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 KRT82Q9NSB4 513 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TSKSQ9UJT2 592 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 NUP153P49790 1475 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 DIP2CQ9Y2E4 1556 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 MYO1CO00159 1063 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 KIF3BO15066 747 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 AP1G2O75843 785 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 PPP4CP60510 307 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 LRRFIP1Q32MZ4 808 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 KIF18AQ8NI77 898 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SUN5Q8TC36 379 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TMC2Q8TDI7 906 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 AASDHPPTQ9NRN7 309 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 DMGDHQ9UI17 866 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TBC1D2BQ9UPU7 963 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 TRAK1Q9UPV9 953 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 SNX5Q9Y5X3 404 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 LMTK2Q8IWU2 1503 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 NAIPQ13075 1403 aa4.42□□□□□ -1.7
R3HDM1-220ENST00000628915 CARMIL1Q5VZK9 1371 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms