RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 STK3Q13188 491 aa21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 EPB41L4AQ9HCS5 686 aaPredicted RBP21.87■■□□□ 1.09
PCDHB2-202ENST00000622947 HMGB1P09429 215 aaKnown RBP21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 GJB2P29033 226 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 LCORLQ8N3X6 602 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 BRF1Q92994 677 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 AGXT2Q9BYV1 514 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 GZF1Q9H116 711 aaPredicted RBP21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 GRPEL1Q9HAV7 217 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 SMC3Q9UQE7 1217 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 GOLGB1Q14789 3259 aaKnown RBP21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 PRKAB2O43741 272 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 MIGA1Q8NAN2 632 aa21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 RPGRQ92834 1020 aaKnown RBP21.86■■□□□ 1.09
PCDHB2-202ENST00000622947 SYT1P21579 422 aa21.85■■□□□ 1.09
PCDHB2-202ENST00000622947 HIBADHP31937 336 aaKnown RBP21.85■■□□□ 1.09
PCDHB2-202ENST00000622947 APPP05067 770 aa21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 MCTP1Q6DN14 999 aa21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 TCHHQ07283 1943 aa21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 KLRG2A4D1S0 409 aaPredicted RBP21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 ZNF213O14771 459 aa21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 TBC1D10CQ8IV04 446 aa21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 ANKIB1Q9P2G1 1089 aa21.84■■□□□ 1.09
PCDHB2-202ENST00000622947 NRXN2Q9P2S2 1712 aa21.83■■□□□ 1.09
PCDHB2-202ENST00000622947 GSG1L2A8MUP6 293 aa21.83■■□□□ 1.09
PCDHB2-202ENST00000622947 MB21D2Q8IYB1 491 aaPredicted RBP21.83■■□□□ 1.09
PCDHB2-202ENST00000622947 PNPLA7Q6ZV29 1317 aa21.83■■□□□ 1.09
PCDHB2-202ENST00000622947 PATL2C9JE40 543 aaKnown RBP21.83■■□□□ 1.08
PCDHB2-202ENST00000622947 CYP7A1P22680 504 aa21.83■■□□□ 1.08
PCDHB2-202ENST00000622947 APOBRQ0VD83 1088 aa21.83■■□□□ 1.08
PCDHB2-202ENST00000622947 IFNL3Q8IZI9 196 aa21.83■■□□□ 1.08
PCDHB2-202ENST00000622947 RAI14Q9P0K7 980 aa21.83■■□□□ 1.08
PCDHB2-202ENST00000622947 ANTXR2P58335 489 aa21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 GPSM2P81274 684 aa21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 RBM10P98175 930 aaKnown RBP21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 TRIM44Q96DX7 344 aaPredicted RBP21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 JAG2Q9Y219 1238 aa21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 TACC3Q9Y6A5 838 aa21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 HOXA10P31260 410 aaPredicted RBP21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 ALX1Q15699 326 aa21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 GTF3C6Q969F1 213 aa21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 INCENPQ9NQS7 918 aa21.82■■□□□ 1.08
PCDHB2-202ENST00000622947 SEMA3EO15041 775 aa21.81■■□□□ 1.08
PCDHB2-202ENST00000622947 STX6O43752 255 aa21.81■■□□□ 1.08
PCDHB2-202ENST00000622947 PTMSP20962 102 aa21.81■■□□□ 1.08
PCDHB2-202ENST00000622947 LMBRD1Q9NUN5 540 aa21.81■■□□□ 1.08
PCDHB2-202ENST00000622947 XDHP47989 1333 aa21.81■■□□□ 1.08
PCDHB2-202ENST00000622947 SCRN1Q12765 414 aa21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 NLGN1Q8N2Q7 840 aa21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 RBM17Q96I25 401 aaKnown RBP21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 LEMD3Q9Y2U8 911 aa21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 CHD4Q14839 1912 aa21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 RGPD3A6NKT7 1758 aaPredicted RBP21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 RGPD4Q7Z3J3 1758 aa21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 WDR33Q9C0J8 1336 aaKnown RBP21.8■■□□□ 1.08
PCDHB2-202ENST00000622947 FGD1P98174 961 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 CHAF1AQ13111 956 aaPredicted RBP21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 FOXD4L6Q3SYB3 417 aaPredicted RBP21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 FOXD4L3Q6VB84 417 aaPredicted RBP21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 RIOK1Q9BRS2 568 aaKnown RBP21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 SLC4A4Q9Y6R1 1079 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 PDS5AQ29RF7 1337 aaKnown RBP21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 JAK2O60674 1132 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 HMGB2P26583 209 aaKnown RBP21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 PRDX5P30044 214 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 FBXL16Q8N461 479 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 NCOA7Q8NI08 942 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 MTMR6Q9Y217 621 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 ZMYM6O95789 1325 aa21.79■■□□□ 1.08
PCDHB2-202ENST00000622947 PFKFB2O60825 505 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 ZSCAN22P10073 491 aaPredicted RBP21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 MSL1Q68DK7 614 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 NSUN4Q96CB9 384 aaKnown RBP21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 NSFL1CQ9UNZ2 370 aaKnown RBP21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 PRC1O43663 620 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 MMP10P09238 476 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 DYNLL1P63167 89 aaKnown RBP21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 MECOMQ03112 1051 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 EZH2Q15910 746 aaKnown RBP21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 SKOR2Q2VWA4 1001 aaPredicted RBP21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 CYB5R4Q7L1T6 521 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 SDR42E1Q8WUS8 393 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 NEDD4P46934 1319 aa21.78■■□□□ 1.08
PCDHB2-202ENST00000622947 LTBP1Q14766 1721 aa21.77■■□□□ 1.08
PCDHB2-202ENST00000622947 CTDSPL2Q05D32 466 aa21.77■■□□□ 1.08
PCDHB2-202ENST00000622947 CRAMP1Q96RY5 1269 aa21.77■■□□□ 1.08
PCDHB2-202ENST00000622947 NAPBQ9H115 298 aa21.77■■□□□ 1.08
PCDHB2-202ENST00000622947 GOLGA6L22H0YM25 854 aa21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 SMIM22K7EJ46 135 aa21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 BBOX1O75936 387 aa21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 CTDNEP1O95476 244 aa21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 PDIA3P30101 505 aaKnown RBP21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 MCM5P33992 734 aa21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 EN1Q05925 392 aaPredicted RBP21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 NAA16Q6N069 864 aaPredicted RBP21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 BAZ2AQ9UIF9 1905 aaKnown RBP21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 LRRC37AA6NMS7 1700 aa21.76■■□□□ 1.07
PCDHB2-202ENST00000622947 CCDC88AQ3V6T2 1871 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms