RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 COL1A1P02452 1464 aaPredicted RBP22.32■■□□□ 1.16
SCAMP4-213ENST00000621748 ZNF70Q9UC06 446 aaPredicted RBP22.31■■□□□ 1.16
SCAMP4-213ENST00000621748 FZD1Q9UP38 647 aa22.31■■□□□ 1.16
SCAMP4-213ENST00000621748 PNMA6EA0A0J9YXQ4 647 aa22.3■■□□□ 1.16
SCAMP4-213ENST00000621748 RLBP1P12271 317 aa22.3■■□□□ 1.16
SCAMP4-213ENST00000621748 SPDYE2Q495Y8 402 aa22.3■■□□□ 1.16
SCAMP4-213ENST00000621748 PPP2R3BQ9Y5P8 575 aa22.3■■□□□ 1.16
SCAMP4-213ENST00000621748 CA12O43570 354 aa22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 ADORA1P30542 326 aa22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 TIMM10P62072 90 aa22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 HDLBPQ00341 1268 aaKnown RBP22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 RASA3Q14644 834 aa22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 ARMC9Q7Z3E5 817 aa22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 CSRNP1Q96S65 589 aa22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 SSC5DA1L4H1 1573 aa22.29■■□□□ 1.16
SCAMP4-213ENST00000621748 PHKA1P46020 1223 aa22.28■■□□□ 1.16
SCAMP4-213ENST00000621748 TFCP2Q12800 502 aa22.28■■□□□ 1.16
SCAMP4-213ENST00000621748 NBPF12Q5TAG4 269 aaPredicted RBP22.28■■□□□ 1.16
SCAMP4-213ENST00000621748 FTSJ3Q8IY81 847 aaKnown RBP22.28■■□□□ 1.16
SCAMP4-213ENST00000621748 WDR66Q8TBY9 1149 aa22.28■■□□□ 1.16
SCAMP4-213ENST00000621748 ANGEL1Q9UNK9 670 aaKnown RBP22.28■■□□□ 1.16
SCAMP4-213ENST00000621748 SUGT1Q9Y2Z0 365 aa22.28■■□□□ 1.16
SCAMP4-213ENST00000621748 LDLRAD1Q5T700 205 aa22.27■■□□□ 1.16
SCAMP4-213ENST00000621748 TEKT1Q969V4 418 aa22.27■■□□□ 1.16
SCAMP4-213ENST00000621748 MRIQ9BWK5 157 aa22.27■■□□□ 1.16
SCAMP4-213ENST00000621748 AKAP11Q9UKA4 1901 aa22.27■■□□□ 1.16
SCAMP4-213ENST00000621748 CASP8AP2Q9UKL3 1982 aa22.27■■□□□ 1.15
SCAMP4-213ENST00000621748 SUPT20HL1Q3ZLR7 823 aa22.26■■□□□ 1.15
SCAMP4-213ENST00000621748 CCDC102BQ68D86 513 aa22.26■■□□□ 1.15
SCAMP4-213ENST00000621748 GNL3LQ9NVN8 582 aaKnown RBP22.26■■□□□ 1.15
SCAMP4-213ENST00000621748 TCP10L2B9ZVM9 353 aa22.25■■□□□ 1.15
SCAMP4-213ENST00000621748 ZBTB7BO15156 539 aaPredicted RBP22.25■■□□□ 1.15
SCAMP4-213ENST00000621748 TNFAIP1Q13829 316 aa22.25■■□□□ 1.15
SCAMP4-213ENST00000621748 MAP3K11Q16584 847 aa22.25■■□□□ 1.15
SCAMP4-213ENST00000621748 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
SCAMP4-213ENST00000621748 ZDHHC15Q96MV8 337 aa22.25■■□□□ 1.15
SCAMP4-213ENST00000621748 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
SCAMP4-213ENST00000621748 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
SCAMP4-213ENST00000621748 APOBEC3HQ6NTF7 200 aaKnown RBP22.24■■□□□ 1.15
SCAMP4-213ENST00000621748 CDAN1Q8IWY9 1227 aa22.24■■□□□ 1.15
SCAMP4-213ENST00000621748 AKAP2Q9Y2D5 859 aa22.24■■□□□ 1.15
SCAMP4-213ENST00000621748 MAST3O60307 1309 aa22.24■■□□□ 1.15
SCAMP4-213ENST00000621748 SEMA3EO15041 775 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 PPP1R12BO60237 982 aaPredicted RBP22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 PRDX5P30044 214 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 CACNB3P54284 484 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 ATP8B2P98198 1209 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 POLA2Q14181 598 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 HHIPL2Q6UWX4 724 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 XAGE2Q96GT9 111 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 TEPSINQ96N21 525 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 RNF186Q9NXI6 227 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 DENND2AQ9ULE3 1009 aa22.23■■□□□ 1.15
SCAMP4-213ENST00000621748 ZBTB22O15209 634 aa22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 USP2O75604 605 aaPredicted RBP22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 TRPA1O75762 1119 aa22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 MKRN3Q13064 507 aaKnown RBP22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 G3BP1Q13283 466 aaKnown RBP eCLIP22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 REM2Q8IYK8 340 aaPredicted RBP22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 PANK1Q8TE04 598 aa22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 TMEM39BQ9GZU3 492 aa22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 SAGE1Q9NXZ1 904 aa22.22■■□□□ 1.15
SCAMP4-213ENST00000621748 CAPN15O75808 1086 aa22.21■■□□□ 1.15
SCAMP4-213ENST00000621748 RASGRF1Q13972 1273 aa22.21■■□□□ 1.15
SCAMP4-213ENST00000621748 SSH3Q8TE77 659 aa22.21■■□□□ 1.15
SCAMP4-213ENST00000621748 CLMNQ96JQ2 1002 aa22.21■■□□□ 1.15
SCAMP4-213ENST00000621748 NEUROD6Q96NK8 337 aa22.21■■□□□ 1.15
SCAMP4-213ENST00000621748 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.21■■□□□ 1.15
SCAMP4-213ENST00000621748 SALL1Q9NSC2 1324 aa22.21■■□□□ 1.15
SCAMP4-213ENST00000621748 LDHBP07195 334 aaKnown RBP22.2■■□□□ 1.14
SCAMP4-213ENST00000621748 TNNI2P48788 182 aa22.2■■□□□ 1.14
SCAMP4-213ENST00000621748 DIXDC1Q155Q3 683 aa22.2■■□□□ 1.14
SCAMP4-213ENST00000621748 SLC10A4Q96EP9 437 aa22.2■■□□□ 1.14
SCAMP4-213ENST00000621748 MVPQ14764 893 aaKnown RBP22.19■■□□□ 1.14
SCAMP4-213ENST00000621748 SPRYD7Q5W111 196 aa22.19■■□□□ 1.14
SCAMP4-213ENST00000621748 DAGLAQ9Y4D2 1042 aa22.19■■□□□ 1.14
SCAMP4-213ENST00000621748 IREB2P48200 963 aaKnown RBP22.18■■□□□ 1.14
SCAMP4-213ENST00000621748 TM4SF4P48230 202 aa22.18■■□□□ 1.14
SCAMP4-213ENST00000621748 FKBP1CQ5VVH2 108 aa22.18■■□□□ 1.14
SCAMP4-213ENST00000621748 UNCXA6NJT0 531 aa22.17■■□□□ 1.14
SCAMP4-213ENST00000621748 TMOD2Q9NZR1 351 aa22.17■■□□□ 1.14
SCAMP4-213ENST00000621748 MYH2Q9UKX2 1941 aa22.16■■□□□ 1.14
SCAMP4-213ENST00000621748 PDS5AQ29RF7 1337 aaKnown RBP22.16■■□□□ 1.14
SCAMP4-213ENST00000621748 SURF6O75683 361 aaKnown RBP22.16■■□□□ 1.14
SCAMP4-213ENST00000621748 CDC42EP5Q6NZY7 148 aa22.16■■□□□ 1.14
SCAMP4-213ENST00000621748 FAM83AQ86UY5 434 aa22.16■■□□□ 1.14
SCAMP4-213ENST00000621748 OTOFQ9HC10 1997 aa22.16■■□□□ 1.14
SCAMP4-213ENST00000621748 GORABQ5T7V8 394 aa22.15■■□□□ 1.14
SCAMP4-213ENST00000621748 ANKRD13AQ8IZ07 590 aa22.15■■□□□ 1.14
SCAMP4-213ENST00000621748 ZGPATQ8N5A5 531 aaKnown RBP22.15■■□□□ 1.14
SCAMP4-213ENST00000621748 WNK4Q96J92 1243 aa22.15■■□□□ 1.14
SCAMP4-213ENST00000621748 HMG20BQ9P0W2 317 aa22.15■■□□□ 1.14
SCAMP4-213ENST00000621748 ABCF2Q9UG63 623 aa22.15■■□□□ 1.14
SCAMP4-213ENST00000621748 NOP58Q9Y2X3 529 aaKnown RBP22.15■■□□□ 1.14
SCAMP4-213ENST00000621748 OS9Q13438 667 aaPredicted RBP22.14■■□□□ 1.13
SCAMP4-213ENST00000621748 CEP85Q6P2H3 762 aa22.14■■□□□ 1.13
SCAMP4-213ENST00000621748 GPR108Q9NPR9 543 aa22.14■■□□□ 1.13
SCAMP4-213ENST00000621748 RCAN3Q9UKA8 241 aa22.14■■□□□ 1.13
SCAMP4-213ENST00000621748 ZBTB48P10074 688 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms