RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 AKAP2Q9Y2D5 859 aa11.2□□□□□ -0.62
TNFAIP3-210ENST00000620204 AOX1Q06278 1338 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 CTAGE15A4D2H0 777 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 VWA3AA6NCI4 1184 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 CTAGE8P0CG41 777 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 CASP8Q14790 479 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 BRD3Q15059 726 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 TADA2BQ86TJ2 420 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 CTAGE6Q86UF2 777 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 PPFIBP1Q86W92 1011 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 CTAGE4Q8IX94 777 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 AFAP1L1Q8TED9 768 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 C8orf76Q96K31 380 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 USP6P35125 1406 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 MYL5Q02045 173 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 PNOCQ13519 176 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 FAM107BQ9H098 131 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 SAMM50Q9Y512 469 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 TMEM94Q12767 1356 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 NRXN3Q9Y4C0 1643 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 KRT32Q14532 448 aa11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-210ENST00000620204 RNF40O75150 1001 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 CCDC175P0C221 793 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 CCDC172P0C7W6 258 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 NLRP12P59046 1061 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 CAGE1Q8TC20 777 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 CAPZA3Q96KX2 299 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 NEUROD6Q96NK8 337 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 KNDC1Q76NI1 1749 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 FANCGO15287 622 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 USP8P40818 1118 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 ATP2B2Q01814 1243 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 ZNF827Q17R98 1081 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 RNF187Q5TA31 235 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 LRRC31Q6UY01 552 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 PNKPQ96T60 521 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 CEP83Q9Y592 693 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 MRFAP1Q9Y605 127 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 PLEKHG2Q9H7P9 1386 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 KDM4FA0A1W2PPD8 638 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 KIAA0754O94854 1291 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 HAND2P61296 217 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 GBP6Q6ZN66 633 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 EYA1Q99502 592 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 POLD4Q9HCU8 107 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 CHPF2Q9P2E5 772 aa11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 HOOK1Q9UJC3 728 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-210ENST00000620204 COL3A1P02461 1466 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 GOLGA6L9A6NEM1 432 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 CORO7P57737 925 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 VSNL1P62760 191 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 SRGAP1Q7Z6B7 1085 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 EAF2Q96CJ1 260 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 SSBP05455 408 aaKnown RBP eCLIP11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 STX17P56962 302 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 CEP57Q86XR8 500 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 GBP3Q9H0R5 595 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 SUFUQ9UMX1 484 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 SHTN1A0MZ66 631 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 CTAGE9A4FU28 777 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 SOWAHDA6NJG2 315 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 ZEB2O60315 1214 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 NBPF6Q5VWK0 638 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 ADALQ6DHV7 355 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 EFCAB13Q8IY85 973 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 FMR1NBQ8N0W7 255 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 CEP112Q8N8E3 955 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 NBPF4Q96M43 638 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 CAPN7Q9Y6W3 813 aa11.17□□□□□ -0.62
TNFAIP3-210ENST00000620204 FRMD3A2A2Y4 597 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 INPP5BP32019 993 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 BCAS4Q8TDM0 211 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 STRN4Q9NRL3 753 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 A0A087WUV0 522 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 PFKFB1P16118 471 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 CDC5LQ99459 802 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 NSUN7Q8NE18 718 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-210ENST00000620204 GCP02774 474 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 HOXC9P31274 260 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 BEND6Q5SZJ8 279 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 ENGASEQ8NFI3 743 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 PSD3Q9NYI0 1048 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 NFE2L3Q9Y4A8 694 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 TECPR2O15040 1411 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 ARHGAP23Q9P227 1491 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 MATR3P43243 847 aaKnown RBP eCLIP11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 CCDC148Q8NFR7 591 aa11.15□□□□□ -0.62
TNFAIP3-210ENST00000620204 RUFY1Q96T51 708 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms