RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 WDR19Q8NEZ3 1342 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 KIF28PB7ZC32 967 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 KIF20AO95235 890 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 CMA1P23946 247 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 KIF23Q02241 960 aaPredicted RBP20.28■□□□□ 0.84
DDX1-207ENST00000617198 AXDND1Q5T1B0 1012 aaPredicted RBP20.28■□□□□ 0.84
DDX1-207ENST00000617198 E4F1Q66K89 784 aaPredicted RBP20.28■□□□□ 0.84
DDX1-207ENST00000617198 TMC6Q7Z403 805 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 GJB4Q9NTQ9 266 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 UBR2Q8IWV8 1755 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 BIN1O00499 593 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 ZNF213O14771 459 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 ARMCX5Q6P1M9 558 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 RGS22Q8NE09 1264 aa20.28■□□□□ 0.84
DDX1-207ENST00000617198 PUS7LQ9H0K6 701 aaKnown RBP20.28■□□□□ 0.84
DDX1-207ENST00000617198 MORC2Q9Y6X9 1032 aaPredicted RBP20.28■□□□□ 0.84
DDX1-207ENST00000617198 SLU7O95391 586 aaKnown RBP20.27■□□□□ 0.84
DDX1-207ENST00000617198 PFKFB1P16118 471 aa20.27■□□□□ 0.84
DDX1-207ENST00000617198 SFPQP23246 707 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDX1-207ENST00000617198 KCNJ6P48051 423 aa20.27■□□□□ 0.84
DDX1-207ENST00000617198 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
DDX1-207ENST00000617198 BCL11BQ9C0K0 894 aaPredicted RBP20.27■□□□□ 0.84
DDX1-207ENST00000617198 PSDA5PKW4 1024 aaPredicted RBP20.27■□□□□ 0.83
DDX1-207ENST00000617198 ZAP70P43403 619 aa20.27■□□□□ 0.83
DDX1-207ENST00000617198 SCARF1Q14162 830 aa20.27■□□□□ 0.83
DDX1-207ENST00000617198 NCAPHQ15003 741 aa20.27■□□□□ 0.83
DDX1-207ENST00000617198 ABCC12Q96J65 1359 aa20.26■□□□□ 0.83
DDX1-207ENST00000617198 KCPQ6ZWJ8 1503 aa20.26■□□□□ 0.83
DDX1-207ENST00000617198 NRDCO43847 1150 aa20.26■□□□□ 0.83
DDX1-207ENST00000617198 PPP1R13BQ96KQ4 1090 aa20.26■□□□□ 0.83
DDX1-207ENST00000617198 C4AP0C0L4 1744 aa20.26■□□□□ 0.83
DDX1-207ENST00000617198 C4BP0C0L5 1744 aa20.26■□□□□ 0.83
DDX1-207ENST00000617198 ATF3P18847 181 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 SLC39A14Q15043 492 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 KMT5BQ4FZB7 885 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 ISCA1Q9BUE6 129 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.25■□□□□ 0.83
DDX1-207ENST00000617198 V9GYY5 206 aaPredicted RBP20.25■□□□□ 0.83
DDX1-207ENST00000617198 CPDO75976 1380 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 ERVV-2B6SEH9 535 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 IKBKBO14920 756 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 GPAA1O43292 621 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 TIGD1Q96MW7 591 aa20.25■□□□□ 0.83
DDX1-207ENST00000617198 TNS3Q68CZ2 1445 aa20.24■□□□□ 0.83
DDX1-207ENST00000617198 WDHD1O75717 1129 aaPredicted RBP20.24■□□□□ 0.83
DDX1-207ENST00000617198 MROH7-TTC4A0A0A0MT08 1334 aa20.24■□□□□ 0.83
DDX1-207ENST00000617198 GABPB1Q06547 395 aaPredicted RBP20.24■□□□□ 0.83
DDX1-207ENST00000617198 ELF2Q15723 593 aa20.24■□□□□ 0.83
DDX1-207ENST00000617198 MYH7P12883 1935 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 MARCKSP29966 332 aaPredicted RBP20.23■□□□□ 0.83
DDX1-207ENST00000617198 FANCCQ00597 558 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 ZCRB1Q8TBF4 217 aaKnown RBP20.23■□□□□ 0.83
DDX1-207ENST00000617198 L2HGDHQ9H9P8 463 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 ZMYM6O95789 1325 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 TUBB4AP04350 444 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 LMOD1P29536 600 aaPredicted RBP20.23■□□□□ 0.83
DDX1-207ENST00000617198 SYKP43405 635 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 TRDNQ13061 729 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 TAF7LQ5H9L4 462 aa20.23■□□□□ 0.83
DDX1-207ENST00000617198 FBXO38Q6PIJ6 1188 aa20.22■□□□□ 0.83
DDX1-207ENST00000617198 PI16Q6UXB8 463 aa20.22■□□□□ 0.83
DDX1-207ENST00000617198 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
DDX1-207ENST00000617198 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.22■□□□□ 0.832e-6■■□□□ 14.4
DDX1-207ENST00000617198 TUBE1Q9UJT0 475 aa20.22■□□□□ 0.83
DDX1-207ENST00000617198 ANGEL1Q9UNK9 670 aaKnown RBP20.22■□□□□ 0.83
DDX1-207ENST00000617198 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
DDX1-207ENST00000617198 PPP6R2O75170 966 aa20.22■□□□□ 0.83
DDX1-207ENST00000617198 HPSEQ9Y251 543 aa20.22■□□□□ 0.83
DDX1-207ENST00000617198 CDKL5O76039 1030 aa20.21■□□□□ 0.83
DDX1-207ENST00000617198 METAP2P50579 478 aaKnown RBP eCLIP20.21■□□□□ 0.83
DDX1-207ENST00000617198 ISM2Q6H9L7 571 aa20.21■□□□□ 0.83
DDX1-207ENST00000617198 SYT10Q6XYQ8 523 aa20.21■□□□□ 0.83
DDX1-207ENST00000617198 VPS37DQ86XT2 251 aa20.21■□□□□ 0.83
DDX1-207ENST00000617198 KRT222Q8N1A0 295 aa20.21■□□□□ 0.83
DDX1-207ENST00000617198 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
DDX1-207ENST00000617198 CCDC85AQ96PX6 553 aaPredicted RBP20.21■□□□□ 0.83
DDX1-207ENST00000617198 NBPF3Q9H094 633 aa20.21■□□□□ 0.83
DDX1-207ENST00000617198 IFIT5Q13325 482 aaKnown RBP20.2■□□□□ 0.82
DDX1-207ENST00000617198 AIFM3Q96NN9 605 aa20.2■□□□□ 0.82
DDX1-207ENST00000617198 HSD3B7Q9H2F3 369 aa20.2■□□□□ 0.82
DDX1-207ENST00000617198 PLA2G12BQ9BX93 195 aa20.2■□□□□ 0.82
DDX1-207ENST00000617198 IGSF3O75054 1194 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 PCCAP05165 728 aaPredicted RBP20.19■□□□□ 0.82
DDX1-207ENST00000617198 CSF1RP07333 972 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 ATP1A3P13637 1013 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
DDX1-207ENST00000617198 ADD2P35612 726 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
DDX1-207ENST00000617198 CCDC93Q567U6 631 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 KRT40Q6A162 431 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 FAM237AA0A1B0GTK4 181 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 SH2B2O14492 632 aaPredicted RBP20.19■□□□□ 0.82
DDX1-207ENST00000617198 CCP110O43303 1012 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 CBFA2T2O43439 604 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 MCAMP43121 646 aa20.19■□□□□ 0.82
DDX1-207ENST00000617198 MYL5Q02045 173 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms