RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 LEO1Q8WVC0 666 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-222ENST00000615540 UBA5Q9GZZ9 404 aa10.27□□□□□ -0.77
PDLIM5-222ENST00000615540 ZNHIT6Q9NWK9 470 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-222ENST00000615540 USP31Q70CQ4 1352 aa10.27□□□□□ -0.77
PDLIM5-222ENST00000615540 KIF5BP33176 963 aa10.27□□□□□ -0.77
PDLIM5-222ENST00000615540 TNNT3P45378 269 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-222ENST00000615540 CBX1P83916 185 aa10.27□□□□□ -0.77
PDLIM5-222ENST00000615540 HSPD1P10809 573 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 ZNF174Q15697 407 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 ZBTB38Q8NAP3 1195 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 SEPT11Q9NVA2 429 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 KCNJ14Q9UNX9 436 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 GYG1P46976 350 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 EIF6P56537 245 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 NOLC1Q14978 699 aaKnown RBP eCLIP10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 EPB41L2O43491 1005 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 SCRN1Q12765 414 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 RRAGBQ5VZM2 374 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 TPTE2Q6XPS3 522 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 GTF3C6Q969F1 213 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 RTL9Q8NET4 1388 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 GNAT2P19087 354 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 TRAPPC3LQ5T215 181 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 LPIN2Q92539 896 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 RICTORQ6R327 1708 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 STX17P56962 302 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 FAM47AQ5JRC9 791 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 KIAA1328Q86T90 577 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 SYNE4Q8N205 404 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 SEC31BQ9NQW1 1179 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 ZBTB1Q9Y2K1 713 aa10.26□□□□□ -0.77
PDLIM5-222ENST00000615540 WDR17Q8IZU2 1322 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 IGKV5-2P06315 115 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 CRKLP46109 303 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 UIMC1Q96RL1 719 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 MAP3K15Q6ZN16 1313 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 LMOD1P29536 600 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 CLCN1P35523 988 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 SDR42E1Q8WUS8 393 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 MROH5Q6ZUA9 1318 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 LDHBP07195 334 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 UBASH3AP57075 661 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 FAM193AP78312 1265 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 PTPN12Q05209 780 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 SHPRHQ149N8 1683 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 PHKA1P46020 1223 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 NOM1Q5C9Z4 860 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 PIGBQ92521 554 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 SPATA31D1Q6ZQQ2 1576 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 UFL1O94874 794 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 TEX35Q5T0J7 233 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 PDCL2Q8N4E4 241 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 DSCC1Q9BVC3 393 aa10.25□□□□□ -0.77
PDLIM5-222ENST00000615540 HEG1Q9ULI3 1381 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 URI1O94763 535 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 DNA2P51530 1060 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 CLSTN2Q9H4D0 955 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 ZKSCAN5Q9Y2L8 839 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 LIG1P18858 919 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 STAT6P42226 847 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 SLF2Q8IX21 1173 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 DENND2AQ9ULE3 1009 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 MTMR6Q9Y217 621 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 HIBADHP31937 336 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 NAPAP54920 295 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 HLFQ16534 295 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 CBX8Q9HC52 389 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
PDLIM5-222ENST00000615540 NR1I2O75469 434 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 ZNF445P59923 1031 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 CNBD1Q8NA66 436 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 CARD10Q9BWT7 1032 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 IFNKQ9P0W0 207 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 SNW1Q13573 536 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 RUFY1Q96T51 708 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 FTOQ9C0B1 505 aaKnown RBP eCLIP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 ANGEL1Q9UNK9 670 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 V9GYY5 206 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 AGLP35573 1532 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 PCCAP05165 728 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 LDHCP07864 332 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 SKILP12757 684 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 CHRNDQ07001 517 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 PARP10Q53GL7 1025 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 MAP4K1Q92918 833 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 RBM17Q96I25 401 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 USP21Q9UK80 565 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 ARHGAP29Q52LW3 1261 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 PIK3AP1Q6ZUJ8 805 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 PUS7LQ9H0K6 701 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 TMOD2Q9NZR1 351 aa10.23□□□□□ -0.77
PDLIM5-222ENST00000615540 VWA3AA6NCI4 1184 aa10.22□□□□□ -0.77
PDLIM5-222ENST00000615540 CT47A1Q5JQC4 288 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-222ENST00000615540 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms