RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TRPM2O94759 1503 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 SYT10Q6XYQ8 523 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 ZNF622Q969S3 477 aaKnown RBP eCLIP19.6■□□□□ 0.732e-6■■□□□ 12.3
HMGXB3-206ENST00000613459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 CCDC160A6NGH7 325 aa19.59■□□□□ 0.73
HMGXB3-206ENST00000613459 CALCOCO2Q13137 446 aa19.59■□□□□ 0.73
HMGXB3-206ENST00000613459 UGGT2Q9NYU1 1516 aa19.59■□□□□ 0.73
HMGXB3-206ENST00000613459 VAMP4O75379 141 aa19.59■□□□□ 0.73
HMGXB3-206ENST00000613459 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
HMGXB3-206ENST00000613459 TTF2Q9UNY4 1162 aaKnown RBP19.59■□□□□ 0.73
HMGXB3-206ENST00000613459 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 CLUL1Q15846 466 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 SEL1L2Q5TEA6 688 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 CCDC110Q8TBZ0 833 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 IFNKQ9P0W0 207 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 PLCH2O75038 1416 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 GBP6Q6ZN66 633 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 B4GALNT4Q76KP1 1039 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 PLEKHM2Q8IWE5 1019 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 PLCD3Q8N3E9 789 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 SH2D4AQ9H788 454 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 ATP6V0A2Q9Y487 856 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 TEX14Q8IWB6 1497 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 NPATQ14207 1427 aa19.58■□□□□ 0.73
HMGXB3-206ENST00000613459 LACTBP83111 547 aaPredicted RBP19.58■□□□□ 0.72
HMGXB3-206ENST00000613459 CAPZA3Q96KX2 299 aa19.58■□□□□ 0.72
HMGXB3-206ENST00000613459 HOXB7P09629 217 aa19.58■□□□□ 0.72
HMGXB3-206ENST00000613459 USP26Q9BXU7 913 aa19.58■□□□□ 0.72
HMGXB3-206ENST00000613459 STIM2Q9P246 746 aa19.58■□□□□ 0.72
HMGXB3-206ENST00000613459 ARHGEF12Q9NZN5 1544 aa19.58■□□□□ 0.72
HMGXB3-206ENST00000613459 EEF2P13639 858 aaKnown RBP19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 CEBPAP49715 358 aaPredicted RBP19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 GUCA1BQ9UMX6 200 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 ATP6V1AP38606 617 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 TERF1P54274 439 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 SV2BQ7L1I2 683 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 EYA3Q99504 573 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 SERPINA10Q9UK55 444 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 RIMS2Q9UQ26 1411 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 ANXA1P04083 346 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 PPP2R5BQ15173 497 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 CFAP58Q5T655 872 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 BAG1Q99933 345 aaPredicted RBP19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 DCAF5Q96JK2 942 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 RAPGEF6Q8TEU7 1601 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 TPTE2Q6XPS3 522 aa19.57■□□□□ 0.72
HMGXB3-206ENST00000613459 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 TTC6Q86TZ1 520 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 TCEANC2Q96MN5 208 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 NIP7Q9Y221 180 aaKnown RBP eCLIP19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 A2MP01023 1474 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 NDC80O14777 642 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 KARSQ15046 597 aaKnown RBP19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 GPR161Q8N6U8 529 aaKnown RBP19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 KIFAP3Q92845 792 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 NUP58Q9BVL2 599 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 WDR66Q8TBY9 1149 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 TXNDC16Q9P2K2 825 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 HSP90AA4PQ58FG1 418 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 PPFIBP2Q8ND30 876 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 AFAP1L1Q8TED9 768 aa19.56■□□□□ 0.72
HMGXB3-206ENST00000613459 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 DEXIO95424 95 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 RHOXF2BP0C7M4 288 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 TNNI2P48788 182 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 SEPT6Q14141 434 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 CCDC50Q8IVM0 306 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 IQCDQ96DY2 449 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 RHOXF2Q9BQY4 288 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 PPP2R3AQ06190 1150 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 MAP7D1Q3KQU3 841 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 CNNM4Q6P4Q7 775 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 LZTFL1Q9NQ48 299 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 POLKQ9UBT6 870 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 EPB41P11171 864 aaKnown RBP19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 CCDC63Q8NA47 563 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 TRIM7Q9C029 511 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 ABCC1P33527 1531 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 ZEB2O60315 1214 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 IFT74Q96LB3 600 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 IMPACTQ9P2X3 320 aa19.55■□□□□ 0.72
HMGXB3-206ENST00000613459 FBLN1P23142 703 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 MTHFSDQ2M296 383 aaKnown RBP19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 DZIP3Q86Y13 1208 aaKnown RBP19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 SWAP70Q9UH65 585 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 RPS6KB1P23443 525 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 PPP1R7Q15435 360 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 TCHPQ9BT92 498 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 FRMD4BQ9Y2L6 1034 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 PARP1P09874 1014 aaKnown RBP19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 IL2RBP14784 551 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 IFT81Q8WYA0 676 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 MAGEB6Q8N7X4 407 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 UHRF1BP1Q6BDS2 1440 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
HMGXB3-206ENST00000613459 PLCB3Q01970 1234 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms