RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 OTOP1Q7RTM1 612 aa21.09■□□□□ 0.97
TVP23A-210ENST00000612195 VPS37DQ86XT2 251 aa21.09■□□□□ 0.97
TVP23A-210ENST00000612195 MRPL50Q8N5N7 158 aaKnown RBP21.09■□□□□ 0.97
TVP23A-210ENST00000612195 TEPSINQ96N21 525 aa21.09■□□□□ 0.97
TVP23A-210ENST00000612195 PTPN18Q99952 460 aa21.09■□□□□ 0.97
TVP23A-210ENST00000612195 MKI67P46013 3256 aaKnown RBP21.09■□□□□ 0.97
TVP23A-210ENST00000612195 CHAF1AQ13111 956 aaPredicted RBP21.08■□□□□ 0.97
TVP23A-210ENST00000612195 CRHR2Q13324 411 aa21.08■□□□□ 0.97
TVP23A-210ENST00000612195 OTUD7BQ6GQQ9 843 aa21.08■□□□□ 0.97
TVP23A-210ENST00000612195 ANKRD44Q8N8A2 993 aa21.08■□□□□ 0.97
TVP23A-210ENST00000612195 ARAP2Q8WZ64 1704 aa21.08■□□□□ 0.97
TVP23A-210ENST00000612195 OPTNQ96CV9 577 aa21.08■□□□□ 0.97
TVP23A-210ENST00000612195 TMEM39BQ9GZU3 492 aa21.08■□□□□ 0.97
TVP23A-210ENST00000612195 OTOFQ9HC10 1997 aa21.08■□□□□ 0.96
TVP23A-210ENST00000612195 ZNF521Q96K83 1311 aa21.07■□□□□ 0.96
TVP23A-210ENST00000612195 TESPA1A2RU30 521 aaPredicted RBP21.07■□□□□ 0.96
TVP23A-210ENST00000612195 METTL24Q5JXM2 366 aa21.07■□□□□ 0.96
TVP23A-210ENST00000612195 PRPF38BQ5VTL8 546 aaKnown RBP21.07■□□□□ 0.96
TVP23A-210ENST00000612195 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.06■□□□□ 0.96
TVP23A-210ENST00000612195 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
TVP23A-210ENST00000612195 CD99L2Q8TCZ2 262 aa21.06■□□□□ 0.96
TVP23A-210ENST00000612195 FRAT2O75474 233 aaPredicted RBP21.05■□□□□ 0.96
TVP23A-210ENST00000612195 PDE8BO95263 885 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
TVP23A-210ENST00000612195 TNNI2P48788 182 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 CAVIN4Q5BKX8 364 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 VGLL2Q8N8G2 317 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 TBC1D22AQ8WUA7 517 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 CNKSR2Q8WXI2 1034 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 ERO1AQ96HE7 468 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 MS4A4AQ96JQ5 239 aa21.05■□□□□ 0.96
TVP23A-210ENST00000612195 BCAMP50895 628 aa21.04■□□□□ 0.96
TVP23A-210ENST00000612195 CACNB3P54284 484 aa21.04■□□□□ 0.96
TVP23A-210ENST00000612195 MAP3K9P80192 1104 aa21.04■□□□□ 0.96
TVP23A-210ENST00000612195 HDLBPQ00341 1268 aaKnown RBP21.04■□□□□ 0.96
TVP23A-210ENST00000612195 PTPRCP08575 1304 aa21.04■□□□□ 0.96
TVP23A-210ENST00000612195 SP3Q02447 781 aa21.03■□□□□ 0.96
TVP23A-210ENST00000612195 VGLL4Q14135 290 aa21.03■□□□□ 0.96
TVP23A-210ENST00000612195 TEKT1Q969V4 418 aa21.03■□□□□ 0.96
TVP23A-210ENST00000612195 USP44Q9H0E7 712 aa21.03■□□□□ 0.96
TVP23A-210ENST00000612195 PTPN22Q9Y2R2 807 aa21.03■□□□□ 0.96
TVP23A-210ENST00000612195 CAP1Q01518 475 aa21.02■□□□□ 0.96
TVP23A-210ENST00000612195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.02■□□□□ 0.96
TVP23A-210ENST00000612195 BRI3BPQ8WY22 251 aa21.02■□□□□ 0.96
TVP23A-210ENST00000612195 SSH1Q8WYL5 1049 aa21.02■□□□□ 0.96
TVP23A-210ENST00000612195 EFCC1Q9HA90 598 aa21.02■□□□□ 0.96
TVP23A-210ENST00000612195 BRCA2P51587 3418 aa21.01■□□□□ 0.95
TVP23A-210ENST00000612195 CCL15-CCL14A0A0B4J2E2 113 aa21.01■□□□□ 0.95
TVP23A-210ENST00000612195 CCL15Q16663 113 aa21.01■□□□□ 0.95
TVP23A-210ENST00000612195 INTS3Q68E01 1043 aaKnown RBP21.01■□□□□ 0.95
TVP23A-210ENST00000612195 CSADQ9Y600 493 aa21.01■□□□□ 0.95
TVP23A-210ENST00000612195 KIAA0100Q14667 2235 aaKnown RBP21■□□□□ 0.95
TVP23A-210ENST00000612195 POTEFA5A3E0 1075 aa21■□□□□ 0.95
TVP23A-210ENST00000612195 GTF2A2P52657 109 aa21■□□□□ 0.95
TVP23A-210ENST00000612195 APOBEC3HQ6NTF7 200 aaKnown RBP21■□□□□ 0.95
TVP23A-210ENST00000612195 OTUD5Q96G74 571 aa21■□□□□ 0.95
TVP23A-210ENST00000612195 ZDHHC15Q96MV8 337 aa21■□□□□ 0.95
TVP23A-210ENST00000612195 MRIQ9BWK5 157 aa21■□□□□ 0.95
TVP23A-210ENST00000612195 FGFR2P21802 821 aa20.99■□□□□ 0.95
TVP23A-210ENST00000612195 PUM3Q15397 648 aaKnown RBP20.99■□□□□ 0.95
TVP23A-210ENST00000612195 E9PSI1 815 aa20.98■□□□□ 0.95
TVP23A-210ENST00000612195 IFIT1P09914 478 aaKnown RBP20.98■□□□□ 0.95
TVP23A-210ENST00000612195 TAF1CQ15572 869 aaPredicted RBP20.98■□□□□ 0.95
TVP23A-210ENST00000612195 FAM83AQ86UY5 434 aa20.98■□□□□ 0.95
TVP23A-210ENST00000612195 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
TVP23A-210ENST00000612195 ZFYVE28Q9HCC9 887 aa20.98■□□□□ 0.95
TVP23A-210ENST00000612195 TMOD2Q9NZR1 351 aa20.98■□□□□ 0.95
TVP23A-210ENST00000612195 SUGT1Q9Y2Z0 365 aa20.98■□□□□ 0.95
TVP23A-210ENST00000612195 KIF16BQ96L93 1317 aa20.98■□□□□ 0.95
TVP23A-210ENST00000612195 SPDYE5A6NIY4 337 aa20.97■□□□□ 0.95
TVP23A-210ENST00000612195 RFX5P48382 616 aaPredicted RBP20.97■□□□□ 0.95
TVP23A-210ENST00000612195 FKBP1CQ5VVH2 108 aa20.97■□□□□ 0.95
TVP23A-210ENST00000612195 ARMC5Q96C12 935 aa20.97■□□□□ 0.95
TVP23A-210ENST00000612195 SNCAIPQ9Y6H5 919 aa20.97■□□□□ 0.95
TVP23A-210ENST00000612195 EYA2O00167 538 aa20.96■□□□□ 0.95
TVP23A-210ENST00000612195 HHIPL2Q6UWX4 724 aa20.96■□□□□ 0.95
TVP23A-210ENST00000612195 ZKSCAN4Q969J2 545 aaPredicted RBP20.96■□□□□ 0.95
TVP23A-210ENST00000612195 WRNIP1Q96S55 665 aa20.96■□□□□ 0.95
TVP23A-210ENST00000612195 MAST3O60307 1309 aa20.96■□□□□ 0.95
TVP23A-210ENST00000612195 SLFN5Q08AF3 891 aa20.95■□□□□ 0.94
TVP23A-210ENST00000612195 ERO1BQ86YB8 467 aa20.95■□□□□ 0.94
TVP23A-210ENST00000612195 PCDH10Q9P2E7 1040 aa20.95■□□□□ 0.94
TVP23A-210ENST00000612195 SLC5A1P13866 664 aa20.94■□□□□ 0.94
TVP23A-210ENST00000612195 ATG9AQ7Z3C6 839 aa20.94■□□□□ 0.94
TVP23A-210ENST00000612195 WDR66Q8TBY9 1149 aa20.94■□□□□ 0.94
TVP23A-210ENST00000612195 LPIN2Q92539 896 aa20.94■□□□□ 0.94
TVP23A-210ENST00000612195 HOOK2Q96ED9 719 aa20.94■□□□□ 0.94
TVP23A-210ENST00000612195 MYH13Q9UKX3 1938 aa20.94■□□□□ 0.94
TVP23A-210ENST00000612195 RBBP6Q7Z6E9 1792 aaKnown RBP20.93■□□□□ 0.94
TVP23A-210ENST00000612195 IRF6O14896 467 aa20.93■□□□□ 0.94
TVP23A-210ENST00000612195 CETPP11597 493 aa20.93■□□□□ 0.94
TVP23A-210ENST00000612195 EN2P19622 333 aaPredicted RBP20.93■□□□□ 0.94
TVP23A-210ENST00000612195 ARHGEF6Q15052 776 aa20.93■□□□□ 0.94
TVP23A-210ENST00000612195 ALDH1L2Q3SY69 923 aa20.93■□□□□ 0.94
TVP23A-210ENST00000612195 MIGA2Q7L4E1 593 aa20.93■□□□□ 0.94
TVP23A-210ENST00000612195 DCAF15Q66K64 600 aa20.92■□□□□ 0.94
TVP23A-210ENST00000612195 CDCA7LQ96GN5 454 aa20.92■□□□□ 0.94
TVP23A-210ENST00000612195 BTBD19C9JJ37 291 aa20.91■□□□□ 0.94
TVP23A-210ENST00000612195 WDHD1O75717 1129 aaPredicted RBP20.91■□□□□ 0.94
TVP23A-210ENST00000612195 PPIL2Q13356 520 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms