RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 KLF18A0A0U1RQI7 1052 aa32.95■■■□□ 2.86
CSPG5-205ENST00000610462 MBD4O95243 580 aa32.94■■■□□ 2.86
CSPG5-205ENST00000610462 SMIM5Q71RC9 77 aa32.94■■■□□ 2.86
CSPG5-205ENST00000610462 NYXQ9GZU5 481 aa32.94■■■□□ 2.86
CSPG5-205ENST00000610462 GTF2E1P29083 439 aaPredicted RBP32.93■■■□□ 2.86
CSPG5-205ENST00000610462 RNF214Q8ND24 703 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 PDLIM2Q96JY6 352 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 TAF1LQ8IZX4 1826 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 LY75O60449 1722 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 UBE4AQ14139 1066 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 HPS5Q9UPZ3 1129 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 ZNF804BA4D1E1 1349 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 CARMIL3Q8ND23 1372 aa32.93■■■□□ 2.86
CSPG5-205ENST00000610462 DHX16O60231 1041 aaKnown RBP32.92■■■□□ 2.86
CSPG5-205ENST00000610462 IFNL3Q8IZI9 196 aa32.92■■■□□ 2.86
CSPG5-205ENST00000610462 CCNL1Q9UK58 526 aaPredicted RBP32.92■■■□□ 2.86
CSPG5-205ENST00000610462 GOLGA8BA8MQT2 603 aa32.91■■■□□ 2.86
CSPG5-205ENST00000610462 GNPATO15228 680 aa32.91■■■□□ 2.86
CSPG5-205ENST00000610462 ARMT1Q9H993 441 aa32.91■■■□□ 2.86
CSPG5-205ENST00000610462 EPB41L4AQ9HCS5 686 aaPredicted RBP32.91■■■□□ 2.86
CSPG5-205ENST00000610462 SRP68Q9UHB9 627 aaKnown RBP32.91■■■□□ 2.86
CSPG5-205ENST00000610462 CFAP45Q9UL16 551 aa32.91■■■□□ 2.86
CSPG5-205ENST00000610462 C4AP0C0L4 1744 aa32.91■■■□□ 2.86
CSPG5-205ENST00000610462 C4BP0C0L5 1744 aa32.91■■■□□ 2.86
CSPG5-205ENST00000610462 FDPSP14324 419 aaKnown RBP32.9■■■□□ 2.86
CSPG5-205ENST00000610462 SBF2Q86WG5 1849 aa32.9■■■□□ 2.86
CSPG5-205ENST00000610462 SETDB2Q96T68 719 aa32.9■■■□□ 2.86
CSPG5-205ENST00000610462 ZPR1O75312 459 aa32.9■■■□□ 2.86
CSPG5-205ENST00000610462 CYB5R4Q7L1T6 521 aa32.9■■■□□ 2.86
CSPG5-205ENST00000610462 PNPLA7Q6ZV29 1317 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 GOLGA6L4A6NEF3 574 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 GNAT2P19087 354 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 FOSBP53539 338 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 NAPBQ9H115 298 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 GNL3LQ9NVN8 582 aaKnown RBP32.89■■■□□ 2.86
CSPG5-205ENST00000610462 LRP2BPQ9P2M1 347 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 DENND2AQ9ULE3 1009 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 MINPP1Q9UNW1 487 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 TIAM2Q8IVF5 1701 aa32.89■■■□□ 2.86
CSPG5-205ENST00000610462 ANGEL1Q9UNK9 670 aaKnown RBP32.89■■■□□ 2.86
CSPG5-205ENST00000610462 RTCBQ9Y3I0 505 aaKnown RBP32.89■■■□□ 2.86
CSPG5-205ENST00000610462 ESPNB1AK53 854 aa32.88■■■□□ 2.85
CSPG5-205ENST00000610462 GSG1L2A8MUP6 293 aa32.87■■■□□ 2.85
CSPG5-205ENST00000610462 LIG1P18858 919 aa32.87■■■□□ 2.85
CSPG5-205ENST00000610462 ADD1P35611 737 aaKnown RBP32.87■■■□□ 2.85
CSPG5-205ENST00000610462 FAM182BQ5T319 152 aa32.87■■■□□ 2.85
CSPG5-205ENST00000610462 CELF1Q92879 486 aaKnown RBP32.87■■■□□ 2.85
CSPG5-205ENST00000610462 FUCA2Q9BTY2 467 aa32.87■■■□□ 2.85
CSPG5-205ENST00000610462 SH2B2O14492 632 aaPredicted RBP32.87■■■□□ 2.85
CSPG5-205ENST00000610462 GIMAP6Q6P9H5 292 aa32.87■■■□□ 2.85
CSPG5-205ENST00000610462 B4E1Z4 1266 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 GYG1P46976 350 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 UVSSAQ2YD98 709 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 NBPF5PQ86XG9 351 aaPredicted RBP32.86■■■□□ 2.85
CSPG5-205ENST00000610462 NKX2-3Q8TAU0 364 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 TMEM87BQ96K49 555 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 NLRP3Q96P20 1036 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 NEDD4P46934 1319 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 ATL3Q6DD88 541 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 LCORLQ8N3X6 602 aa32.86■■■□□ 2.85
CSPG5-205ENST00000610462 PPFIA3O75145 1194 aa32.85■■■□□ 2.85
CSPG5-205ENST00000610462 PGBD1Q96JS3 809 aa32.85■■■□□ 2.85
CSPG5-205ENST00000610462 GJD4Q96KN9 370 aaPredicted RBP32.85■■■□□ 2.85
CSPG5-205ENST00000610462 CAVIN4Q5BKX8 364 aa32.84■■■□□ 2.85
CSPG5-205ENST00000610462 NACAP1Q9BZK3 213 aa32.84■■■□□ 2.85
CSPG5-205ENST00000610462 IQSEC3Q9UPP2 1182 aaPredicted RBP32.84■■■□□ 2.85
CSPG5-205ENST00000610462 SLC4A4Q9Y6R1 1079 aa32.84■■■□□ 2.85
CSPG5-205ENST00000610462 CPLX1O14810 134 aa32.83■■■□□ 2.85
CSPG5-205ENST00000610462 TPTE2Q6XPS3 522 aa32.83■■■□□ 2.85
CSPG5-205ENST00000610462 ARHGEF1Q92888 912 aaKnown RBP32.83■■■□□ 2.85
CSPG5-205ENST00000610462 NUP62CLQ9H1M0 184 aa32.83■■■□□ 2.85
CSPG5-205ENST00000610462 COL1A1P02452 1464 aaPredicted RBP32.82■■■□□ 2.85
CSPG5-205ENST00000610462 PRKAB2O43741 272 aa32.82■■■□□ 2.85
CSPG5-205ENST00000610462 GUCY1B3Q02153 619 aa32.82■■■□□ 2.85
CSPG5-205ENST00000610462 ZNF396Q96N95 335 aaPredicted RBP32.82■■■□□ 2.85
CSPG5-205ENST00000610462 ORC3Q9UBD5 711 aaPredicted RBP32.82■■■□□ 2.85
CSPG5-205ENST00000610462 WTIPA6NIX2 430 aaPredicted RBP32.82■■■□□ 2.84
CSPG5-205ENST00000610462 RPS8P62241 208 aaKnown RBP32.82■■■□□ 2.84
CSPG5-205ENST00000610462 HS1BP3Q53T59 392 aa32.82■■■□□ 2.84
CSPG5-205ENST00000610462 RAB11FIP4Q86YS3 637 aa32.82■■■□□ 2.84
CSPG5-205ENST00000610462 CNNM2Q9H8M5 875 aa32.82■■■□□ 2.84
CSPG5-205ENST00000610462 RCOR1Q9UKL0 485 aa32.82■■■□□ 2.84
CSPG5-205ENST00000610462 CYP7A1P22680 504 aa32.81■■■□□ 2.84
CSPG5-205ENST00000610462 CLCN1P35523 988 aa32.81■■■□□ 2.84
CSPG5-205ENST00000610462 CTDSPL2Q05D32 466 aa32.81■■■□□ 2.84
CSPG5-205ENST00000610462 IGDCC4Q8TDY8 1250 aa32.81■■■□□ 2.84
CSPG5-205ENST00000610462 DDX19AQ9NUU7 478 aaKnown RBP32.81■■■□□ 2.84
CSPG5-205ENST00000610462 AKNAD1Q5T1N1 836 aa32.81■■■□□ 2.84
CSPG5-205ENST00000610462 FAM84BQ96KN1 310 aaPredicted RBP32.81■■■□□ 2.84
CSPG5-205ENST00000610462 TDO2P48775 406 aa32.8■■■□□ 2.84
CSPG5-205ENST00000610462 CACNA1SQ13698 1873 aa32.8■■■□□ 2.84
CSPG5-205ENST00000610462 MEX3CQ5U5Q3 659 aaKnown RBP32.8■■■□□ 2.84
CSPG5-205ENST00000610462 AMIGO3Q86WK7 504 aa32.8■■■□□ 2.84
CSPG5-205ENST00000610462 MIGA1Q8NAN2 632 aa32.8■■■□□ 2.84
CSPG5-205ENST00000610462 C8orf76Q96K31 380 aa32.8■■■□□ 2.84
CSPG5-205ENST00000610462 DACT1Q9NYF0 836 aa32.8■■■□□ 2.84
CSPG5-205ENST00000610462 ABCF2Q9UG63 623 aa32.8■■■□□ 2.84
CSPG5-205ENST00000610462 MYH13Q9UKX3 1938 aa32.79■■■□□ 2.84
CSPG5-205ENST00000610462 VPS37DQ86XT2 251 aa32.79■■■□□ 2.84
CSPG5-205ENST00000610462 BICD2Q8TD16 824 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms