RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 COA1Q9GZY4 146 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 TAF6LQ9Y6J9 622 aa21.03■□□□□ 0.96
SHKBP1-224ENST00000600718 IMMTQ16891 758 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-224ENST00000600718 NEK1Q96PY6 1258 aa21.02■□□□□ 0.96
SHKBP1-224ENST00000600718 ARMT1Q9H993 441 aa21.02■□□□□ 0.96
SHKBP1-224ENST00000600718 MYH13Q9UKX3 1938 aa21.02■□□□□ 0.95
SHKBP1-224ENST00000600718 MAGEB6P1A0A0J9YX57 407 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 APPP05067 770 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 MECOMQ03112 1051 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 ALDH8A1Q9H2A2 487 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 SLKQ9H2G2 1235 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 ZBTB7AO95365 584 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 HMGB1P09429 215 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 RPS6KB1P23443 525 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 POLD1P28340 1107 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 TTLL5Q6EMB2 1281 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 C7orf43Q8WVR3 580 aa21.01■□□□□ 0.95
SHKBP1-224ENST00000600718 ZMYM6O95789 1325 aa21■□□□□ 0.95
SHKBP1-224ENST00000600718 RIMBP2O15034 1052 aa21■□□□□ 0.95
SHKBP1-224ENST00000600718 LDHBP07195 334 aaKnown RBP21■□□□□ 0.95
SHKBP1-224ENST00000600718 CPA1P15085 419 aa21■□□□□ 0.95
SHKBP1-224ENST00000600718 PRDX5P30044 214 aa21■□□□□ 0.95
SHKBP1-224ENST00000600718 ZNF384Q8TF68 577 aa21■□□□□ 0.95
SHKBP1-224ENST00000600718 TMX3Q96JJ7 454 aa21■□□□□ 0.95
SHKBP1-224ENST00000600718 ZNF213O14771 459 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 AK2P54819 239 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 ADGRA1Q86SQ6 560 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 LCORLQ8N3X6 602 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 MIGA1Q8NAN2 632 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 JAG2Q9Y219 1238 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 FAM205AQ6ZU69 1335 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 DUOX1Q9NRD9 1551 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 R3HDM1Q15032 1099 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 GRIPAP1Q4V328 841 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 DZIP1Q86YF9 867 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 TBC1D22AQ8WUA7 517 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 RTFDC1Q9BY42 306 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 NACAP1Q9BZK3 213 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 LIMCH1Q9UPQ0 1083 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 ATF5Q9Y2D1 282 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
SHKBP1-224ENST00000600718 CACNA1SQ13698 1873 aa20.98■□□□□ 0.95
SHKBP1-224ENST00000600718 E7EWF7 191 aa20.98■□□□□ 0.95
SHKBP1-224ENST00000600718 GSTO1P78417 241 aa20.98■□□□□ 0.95
SHKBP1-224ENST00000600718 IFNL3Q8IZI9 196 aa20.98■□□□□ 0.95
SHKBP1-224ENST00000600718 TTLL6Q8N841 843 aa20.98■□□□□ 0.95
SHKBP1-224ENST00000600718 RIOK1Q9BRS2 568 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-224ENST00000600718 SLX4Q8IY92 1834 aa20.98■□□□□ 0.95
SHKBP1-224ENST00000600718 GSG1L2A8MUP6 293 aa20.97■□□□□ 0.95
SHKBP1-224ENST00000600718 ANKRD1Q15327 319 aa20.97■□□□□ 0.95
SHKBP1-224ENST00000600718 STOX1Q6ZVD7 989 aa20.97■□□□□ 0.95
SHKBP1-224ENST00000600718 A0A0G2JLW4 131 aa20.97■□□□□ 0.95
SHKBP1-224ENST00000600718 TGFB2P61812 414 aa20.97■□□□□ 0.95
SHKBP1-224ENST00000600718 CUL4AQ13619 759 aa20.97■□□□□ 0.95
SHKBP1-224ENST00000600718 G3V3G9 751 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 LDHCP07864 332 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 DPEP1P16444 411 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 DCAF8Q5TAQ9 597 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 SUPT20HQ8NEM7 779 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 ZSCAN31Q96LW9 406 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 NAPBQ9H115 298 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 CHMP5Q9NZZ3 219 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 ZNF219Q9P2Y4 722 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 KCNA3P22001 575 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 DDIT3P35638 169 aa20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 NOL8Q76FK4 1167 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 DHX32Q7L7V1 743 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-224ENST00000600718 PRKAB2O43741 272 aa20.95■□□□□ 0.94
SHKBP1-224ENST00000600718 HAND2P61296 217 aa20.95■□□□□ 0.94
SHKBP1-224ENST00000600718 CWC22Q9HCG8 908 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-224ENST00000600718 EPB41L4AQ9HCS5 686 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-224ENST00000600718 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.94
SHKBP1-224ENST00000600718 CIZ1Q9ULV3 898 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-224ENST00000600718 MAST2Q6P0Q8 1798 aa20.95■□□□□ 0.94
SHKBP1-224ENST00000600718 DYNLL1P63167 89 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 INTS4Q96HW7 963 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 DLEC1Q9Y238 1755 aa20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 GTF2IP78347 998 aa20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 COL9A3Q14050 684 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 DOK7Q18PE1 504 aa20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 MFSD14BQ5SR56 506 aa20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 PODNQ7Z5L7 613 aa20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 SUGT1Q9Y2Z0 365 aa20.94■□□□□ 0.94
SHKBP1-224ENST00000600718 KIF13BQ9NQT8 1826 aa20.93■□□□□ 0.94
SHKBP1-224ENST00000600718 C21orf2O43822 256 aa20.93■□□□□ 0.94
SHKBP1-224ENST00000600718 TDO2P48775 406 aa20.93■□□□□ 0.94
SHKBP1-224ENST00000600718 EXOSC10Q01780 885 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-224ENST00000600718 GIMAP6Q6P9H5 292 aa20.93■□□□□ 0.94
SHKBP1-224ENST00000600718 SH2B1Q9NRF2 756 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-224ENST00000600718 GRIK5Q16478 980 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 SLF2Q8IX21 1173 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 RTKN2Q8IZC4 609 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 CRNKL1Q9BZJ0 848 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 CCDC88AQ3V6T2 1871 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 SNED1Q8TER0 1413 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 CCDC93Q567U6 631 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 CERS3Q8IU89 383 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 NCOA7Q8NI08 942 aa20.92■□□□□ 0.94
SHKBP1-224ENST00000600718 AATFQ9NY61 560 aaKnown RBP eCLIP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms