RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 TCP10L2B9ZVM9 353 aa20.03■□□□□ 0.8
LINC02560-201ENST00000596379 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
LINC02560-201ENST00000596379 CDAN1Q8IWY9 1227 aa20.03■□□□□ 0.8
LINC02560-201ENST00000596379 KLHDC4Q8TBB5 520 aa20.03■□□□□ 0.8
LINC02560-201ENST00000596379 TEPSINQ96N21 525 aa20.03■□□□□ 0.8
LINC02560-201ENST00000596379 ELP3Q9H9T3 547 aa20.03■□□□□ 0.8
LINC02560-201ENST00000596379 ARAP2Q8WZ64 1704 aa20.02■□□□□ 0.8
LINC02560-201ENST00000596379 FRAT2O75474 233 aaPredicted RBP20.02■□□□□ 0.8
LINC02560-201ENST00000596379 PDE8BO95263 885 aa20.02■□□□□ 0.8
LINC02560-201ENST00000596379 CAVIN4Q5BKX8 364 aa20.02■□□□□ 0.8
LINC02560-201ENST00000596379 OTUD7BQ6GQQ9 843 aa20.02■□□□□ 0.8
LINC02560-201ENST00000596379 TMEM39BQ9GZU3 492 aa20.02■□□□□ 0.8
LINC02560-201ENST00000596379 TRIM17Q9Y577 477 aa20.02■□□□□ 0.8
LINC02560-201ENST00000596379 PTPRCP08575 1304 aa20.02■□□□□ 0.79
LINC02560-201ENST00000596379 TNNI2P48788 182 aa20.01■□□□□ 0.79
LINC02560-201ENST00000596379 VGLL2Q8N8G2 317 aa20.01■□□□□ 0.79
LINC02560-201ENST00000596379 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
LINC02560-201ENST00000596379 OPTNQ96CV9 577 aa20.01■□□□□ 0.79
LINC02560-201ENST00000596379 PTPN18Q99952 460 aa20.01■□□□□ 0.79
LINC02560-201ENST00000596379 USP44Q9H0E7 712 aa20.01■□□□□ 0.79
LINC02560-201ENST00000596379 OTOFQ9HC10 1997 aa20.01■□□□□ 0.79
LINC02560-201ENST00000596379 TESPA1A2RU30 521 aaPredicted RBP20■□□□□ 0.79
LINC02560-201ENST00000596379 BCAMP50895 628 aa20■□□□□ 0.79
LINC02560-201ENST00000596379 HDLBPQ00341 1268 aaKnown RBP20■□□□□ 0.79
LINC02560-201ENST00000596379 CRHR2Q13324 411 aa20■□□□□ 0.79
LINC02560-201ENST00000596379 PPP1R3FQ6ZSY5 799 aaPredicted RBP20■□□□□ 0.79
LINC02560-201ENST00000596379 OTOP1Q7RTM1 612 aa20■□□□□ 0.79
LINC02560-201ENST00000596379 TBC1D22AQ8WUA7 517 aa20■□□□□ 0.79
LINC02560-201ENST00000596379 E9PSI1 815 aa19.99■□□□□ 0.79
LINC02560-201ENST00000596379 MAP3K9P80192 1104 aa19.99■□□□□ 0.79
LINC02560-201ENST00000596379 CACNB3P54284 484 aa19.98■□□□□ 0.79
LINC02560-201ENST00000596379 CNKSR2Q8WXI2 1034 aa19.98■□□□□ 0.79
LINC02560-201ENST00000596379 TEKT1Q969V4 418 aa19.98■□□□□ 0.79
LINC02560-201ENST00000596379 MS4A4AQ96JQ5 239 aa19.98■□□□□ 0.79
LINC02560-201ENST00000596379 SLFN5Q08AF3 891 aa19.97■□□□□ 0.79
LINC02560-201ENST00000596379 VGLL4Q14135 290 aa19.97■□□□□ 0.79
LINC02560-201ENST00000596379 CD99L2Q8TCZ2 262 aa19.97■□□□□ 0.79
LINC02560-201ENST00000596379 ERO1AQ96HE7 468 aa19.97■□□□□ 0.79
LINC02560-201ENST00000596379 IFIT1P09914 478 aaKnown RBP19.96■□□□□ 0.79
LINC02560-201ENST00000596379 FGFR2P21802 821 aa19.96■□□□□ 0.79
LINC02560-201ENST00000596379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.96■□□□□ 0.79
LINC02560-201ENST00000596379 MRIQ9BWK5 157 aa19.96■□□□□ 0.79
LINC02560-201ENST00000596379 RFX5P48382 616 aaPredicted RBP19.95■□□□□ 0.78
LINC02560-201ENST00000596379 SP3Q02447 781 aa19.95■□□□□ 0.78
LINC02560-201ENST00000596379 PUM3Q15397 648 aaKnown RBP19.95■□□□□ 0.78
LINC02560-201ENST00000596379 BRI3BPQ8WY22 251 aa19.95■□□□□ 0.78
LINC02560-201ENST00000596379 ZDHHC15Q96MV8 337 aa19.95■□□□□ 0.78
LINC02560-201ENST00000596379 PTPN22Q9Y2R2 807 aa19.95■□□□□ 0.78
LINC02560-201ENST00000596379 CSADQ9Y600 493 aa19.95■□□□□ 0.78
LINC02560-201ENST00000596379 CCL15-CCL14A0A0B4J2E2 113 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 EYA2O00167 538 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 GTF2A2P52657 109 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 CCL15Q16663 113 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 PRPF38BQ5VTL8 546 aaKnown RBP19.94■□□□□ 0.78
LINC02560-201ENST00000596379 APOBEC3HQ6NTF7 200 aaKnown RBP19.94■□□□□ 0.78
LINC02560-201ENST00000596379 EFCC1Q9HA90 598 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 TMOD2Q9NZR1 351 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 SUGT1Q9Y2Z0 365 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 KIF16BQ96L93 1317 aa19.94■□□□□ 0.78
LINC02560-201ENST00000596379 CAP1Q01518 475 aa19.93■□□□□ 0.78
LINC02560-201ENST00000596379 ALDH1L2Q3SY69 923 aa19.93■□□□□ 0.78
LINC02560-201ENST00000596379 FAM83AQ86UY5 434 aa19.93■□□□□ 0.78
LINC02560-201ENST00000596379 OTUD5Q96G74 571 aa19.93■□□□□ 0.78
LINC02560-201ENST00000596379 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
LINC02560-201ENST00000596379 SLC5A1P13866 664 aa19.92■□□□□ 0.78
LINC02560-201ENST00000596379 TAF1CQ15572 869 aaPredicted RBP19.92■□□□□ 0.78
LINC02560-201ENST00000596379 INTS3Q68E01 1043 aaKnown RBP19.92■□□□□ 0.78
LINC02560-201ENST00000596379 HHIPL2Q6UWX4 724 aa19.92■□□□□ 0.78
LINC02560-201ENST00000596379 LPIN2Q92539 896 aa19.92■□□□□ 0.78
LINC02560-201ENST00000596379 ZFYVE28Q9HCC9 887 aa19.92■□□□□ 0.78
LINC02560-201ENST00000596379 MAST3O60307 1309 aa19.92■□□□□ 0.78
LINC02560-201ENST00000596379 POTEFA5A3E0 1075 aa19.91■□□□□ 0.78
LINC02560-201ENST00000596379 FKBP1CQ5VVH2 108 aa19.91■□□□□ 0.78
LINC02560-201ENST00000596379 ATG9AQ7Z3C6 839 aa19.91■□□□□ 0.78
LINC02560-201ENST00000596379 FAM43AQ8N2R8 423 aa19.91■□□□□ 0.78
LINC02560-201ENST00000596379 WDR66Q8TBY9 1149 aa19.91■□□□□ 0.78
LINC02560-201ENST00000596379 ZKSCAN4Q969J2 545 aaPredicted RBP19.91■□□□□ 0.78
LINC02560-201ENST00000596379 SMC4Q9NTJ3 1288 aa19.91■□□□□ 0.78
LINC02560-201ENST00000596379 MYH13Q9UKX3 1938 aa19.91■□□□□ 0.78
LINC02560-201ENST00000596379 SPDYE5A6NIY4 337 aa19.9■□□□□ 0.78
LINC02560-201ENST00000596379 ERO1BQ86YB8 467 aa19.9■□□□□ 0.78
LINC02560-201ENST00000596379 HOOK2Q96ED9 719 aa19.9■□□□□ 0.78
LINC02560-201ENST00000596379 WRNIP1Q96S55 665 aa19.9■□□□□ 0.78
LINC02560-201ENST00000596379 SNCAIPQ9Y6H5 919 aa19.9■□□□□ 0.78
LINC02560-201ENST00000596379 KIAA0100Q14667 2235 aaKnown RBP19.89■□□□□ 0.77
LINC02560-201ENST00000596379 MIGA2Q7L4E1 593 aa19.89■□□□□ 0.77
LINC02560-201ENST00000596379 SIL1Q9H173 461 aa19.89■□□□□ 0.77
LINC02560-201ENST00000596379 UBTFL1P0CB47 393 aaPredicted RBP19.88■□□□□ 0.77
LINC02560-201ENST00000596379 TRMT2AQ8IZ69 625 aaKnown RBP19.88■□□□□ 0.77
LINC02560-201ENST00000596379 ARMC5Q96C12 935 aa19.88■□□□□ 0.77
LINC02560-201ENST00000596379 AK9Q5TCS8 1911 aa19.87■□□□□ 0.77
LINC02560-201ENST00000596379 IRF6O14896 467 aa19.87■□□□□ 0.77
LINC02560-201ENST00000596379 CETPP11597 493 aa19.87■□□□□ 0.77
LINC02560-201ENST00000596379 DCAF15Q66K64 600 aa19.87■□□□□ 0.77
LINC02560-201ENST00000596379 CEP126Q9P2H0 1117 aa19.87■□□□□ 0.77
LINC02560-201ENST00000596379 NOB1Q9ULX3 412 aaKnown RBP19.87■□□□□ 0.77
LINC02560-201ENST00000596379 CIAO1O76071 339 aa19.86■□□□□ 0.77
LINC02560-201ENST00000596379 SNAPC2Q13487 334 aa19.86■□□□□ 0.77
LINC02560-201ENST00000596379 ARHGEF6Q15052 776 aa19.86■□□□□ 0.77
LINC02560-201ENST00000596379 DIXDC1Q155Q3 683 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms