RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TEPSINQ96N21 525 aa22.04■■□□□ 1.12
SHKBP1-203ENST00000594298 TDRD3Q9H7E2 651 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-203ENST00000594298 CRKP46108 304 aa22.03■■□□□ 1.12
SHKBP1-203ENST00000594298 OTUD7BQ6GQQ9 843 aa22.03■■□□□ 1.12
SHKBP1-203ENST00000594298 ANKRD44Q8N8A2 993 aa22.03■■□□□ 1.12
SHKBP1-203ENST00000594298 PTPRCP08575 1304 aa22.03■■□□□ 1.12
SHKBP1-203ENST00000594298 HDLBPQ00341 1268 aaKnown RBP22.02■■□□□ 1.12
SHKBP1-203ENST00000594298 VGLL2Q8N8G2 317 aa22.02■■□□□ 1.12
SHKBP1-203ENST00000594298 TBC1D22AQ8WUA7 517 aa22.02■■□□□ 1.12
SHKBP1-203ENST00000594298 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.02■■□□□ 1.12
SHKBP1-203ENST00000594298 PDE8BO95263 885 aa22.01■■□□□ 1.11
SHKBP1-203ENST00000594298 ALDH1L2Q3SY69 923 aa22.01■■□□□ 1.11
SHKBP1-203ENST00000594298 LRRC24Q50LG9 513 aa22.01■■□□□ 1.11
SHKBP1-203ENST00000594298 CAVIN4Q5BKX8 364 aa22.01■■□□□ 1.11
SHKBP1-203ENST00000594298 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
SHKBP1-203ENST00000594298 VPS37DQ86XT2 251 aa22.01■■□□□ 1.11
SHKBP1-203ENST00000594298 ARAP2Q8WZ64 1704 aa22■■□□□ 1.11
SHKBP1-203ENST00000594298 TNNI2P48788 182 aa22■■□□□ 1.11
SHKBP1-203ENST00000594298 PRPF38BQ5VTL8 546 aaKnown RBP22■■□□□ 1.11
SHKBP1-203ENST00000594298 OTOP1Q7RTM1 612 aa22■■□□□ 1.11
SHKBP1-203ENST00000594298 OPTNQ96CV9 577 aa22■■□□□ 1.11
SHKBP1-203ENST00000594298 PTPN18Q99952 460 aa22■■□□□ 1.11
SHKBP1-203ENST00000594298 TRIM17Q9Y577 477 aa22■■□□□ 1.11
SHKBP1-203ENST00000594298 KIF16BQ96L93 1317 aa22■■□□□ 1.11
SHKBP1-203ENST00000594298 TCP10L2B9ZVM9 353 aa21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 CRHR2Q13324 411 aa21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 GRIK5Q16478 980 aa21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 CDAN1Q8IWY9 1227 aa21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 ERO1AQ96HE7 468 aa21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 MRIQ9BWK5 157 aa21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 ELP3Q9H9T3 547 aa21.99■■□□□ 1.11
SHKBP1-203ENST00000594298 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.98■■□□□ 1.11
SHKBP1-203ENST00000594298 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
SHKBP1-203ENST00000594298 MS4A4AQ96JQ5 239 aa21.98■■□□□ 1.11
SHKBP1-203ENST00000594298 TMEM39BQ9GZU3 492 aa21.98■■□□□ 1.11
SHKBP1-203ENST00000594298 IQSEC3Q9UPP2 1182 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-203ENST00000594298 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
SHKBP1-203ENST00000594298 TEKT1Q969V4 418 aa21.97■■□□□ 1.11
SHKBP1-203ENST00000594298 USP44Q9H0E7 712 aa21.97■■□□□ 1.11
SHKBP1-203ENST00000594298 SUGT1Q9Y2Z0 365 aa21.97■■□□□ 1.11
SHKBP1-203ENST00000594298 FRAT2O75474 233 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 FGFR2P21802 821 aa21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 MAP3K9P80192 1104 aa21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 VGLL4Q14135 290 aa21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 INTS3Q68E01 1043 aaKnown RBP21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 ZDHHC15Q96MV8 337 aa21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 SMC4Q9NTJ3 1288 aa21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 ZBED9Q6R2W3 1325 aa21.96■■□□□ 1.11
SHKBP1-203ENST00000594298 BCAMP50895 628 aa21.95■■□□□ 1.1
SHKBP1-203ENST00000594298 PUM3Q15397 648 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-203ENST00000594298 KLHDC4Q8TBB5 520 aa21.95■■□□□ 1.1
SHKBP1-203ENST00000594298 PTPN22Q9Y2R2 807 aa21.95■■□□□ 1.1
SHKBP1-203ENST00000594298 MAST3O60307 1309 aa21.95■■□□□ 1.1
SHKBP1-203ENST00000594298 OTOFQ9HC10 1997 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 IFIT1P09914 478 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 GTF2A2P52657 109 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 SP3Q02447 781 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 FKBP1CQ5VVH2 108 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 FAM83AQ86UY5 434 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 CD99L2Q8TCZ2 262 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 BRI3BPQ8WY22 251 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 CSADQ9Y600 493 aa21.94■■□□□ 1.1
SHKBP1-203ENST00000594298 APOBEC3HQ6NTF7 200 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-203ENST00000594298 CNKSR2Q8WXI2 1034 aa21.93■■□□□ 1.1
SHKBP1-203ENST00000594298 PDE4DIPQ5VU43 2346 aa21.92■■□□□ 1.1
SHKBP1-203ENST00000594298 SPDYE5A6NIY4 337 aa21.92■■□□□ 1.1
SHKBP1-203ENST00000594298 RFX5P48382 616 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-203ENST00000594298 HHIPL2Q6UWX4 724 aa21.92■■□□□ 1.1
SHKBP1-203ENST00000594298 HOOK2Q96ED9 719 aa21.92■■□□□ 1.1
SHKBP1-203ENST00000594298 EFCC1Q9HA90 598 aa21.92■■□□□ 1.1
SHKBP1-203ENST00000594298 TMOD2Q9NZR1 351 aa21.92■■□□□ 1.1
SHKBP1-203ENST00000594298 CCL15-CCL14A0A0B4J2E2 113 aa21.91■■□□□ 1.1
SHKBP1-203ENST00000594298 EYA2O00167 538 aa21.91■■□□□ 1.1
SHKBP1-203ENST00000594298 CACNB3P54284 484 aa21.91■■□□□ 1.1
SHKBP1-203ENST00000594298 CCL15Q16663 113 aa21.91■■□□□ 1.1
SHKBP1-203ENST00000594298 ARMC5Q96C12 935 aa21.91■■□□□ 1.1
SHKBP1-203ENST00000594298 RPAP1Q9BWH6 1393 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-203ENST00000594298 CAP1Q01518 475 aa21.9■■□□□ 1.1
SHKBP1-203ENST00000594298 LPIN2Q92539 896 aa21.9■■□□□ 1.1
SHKBP1-203ENST00000594298 OTUD5Q96G74 571 aa21.9■■□□□ 1.1
SHKBP1-203ENST00000594298 ZFYVE28Q9HCC9 887 aa21.9■■□□□ 1.1
SHKBP1-203ENST00000594298 PCDH10Q9P2E7 1040 aa21.9■■□□□ 1.1
SHKBP1-203ENST00000594298 SNCAIPQ9Y6H5 919 aa21.9■■□□□ 1.1
SHKBP1-203ENST00000594298 HTTP42858 3142 aa21.89■■□□□ 1.1
SHKBP1-203ENST00000594298 SLC5A1P13866 664 aa21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 RARSP54136 660 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 TAF1CQ15572 869 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 ERO1BQ86YB8 467 aa21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 FAM43AQ8N2R8 423 aa21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 WDR66Q8TBY9 1149 aa21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 ZCCHC17Q9NP64 241 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 FBXO3Q9UK99 471 aa21.89■■□□□ 1.09
SHKBP1-203ENST00000594298 POTEFA5A3E0 1075 aa21.88■■□□□ 1.09
SHKBP1-203ENST00000594298 ARHGEF6Q15052 776 aa21.88■■□□□ 1.09
SHKBP1-203ENST00000594298 WRNIP1Q96S55 665 aa21.88■■□□□ 1.09
SHKBP1-203ENST00000594298 CETPP11597 493 aa21.87■■□□□ 1.09
SHKBP1-203ENST00000594298 DCAF15Q66K64 600 aa21.87■■□□□ 1.09
SHKBP1-203ENST00000594298 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
SHKBP1-203ENST00000594298 API5Q9BZZ5 524 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms