RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 USP44Q9H0E7 712 aa20.04■□□□□ 0.8
GTF2F1-203ENST00000594213 PDE8BO95263 885 aa20.03■□□□□ 0.8
GTF2F1-203ENST00000594213 HDLBPQ00341 1268 aaKnown RBP20.03■□□□□ 0.8
GTF2F1-203ENST00000594213 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.03■□□□□ 0.8
GTF2F1-203ENST00000594213 MS4A4AQ96JQ5 239 aa20.03■□□□□ 0.8
GTF2F1-203ENST00000594213 MRIQ9BWK5 157 aa20.03■□□□□ 0.8
GTF2F1-203ENST00000594213 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
GTF2F1-203ENST00000594213 PTPRCP08575 1304 aa20.02■□□□□ 0.8
GTF2F1-203ENST00000594213 OTOP1Q7RTM1 612 aa20.02■□□□□ 0.8
GTF2F1-203ENST00000594213 SSH1Q8WYL5 1049 aa20.02■□□□□ 0.8
GTF2F1-203ENST00000594213 TMEM39BQ9GZU3 492 aa20.02■□□□□ 0.8
GTF2F1-203ENST00000594213 IQSEC3Q9UPP2 1182 aaPredicted RBP20.02■□□□□ 0.8
GTF2F1-203ENST00000594213 TCP10L2B9ZVM9 353 aa20.01■□□□□ 0.79
GTF2F1-203ENST00000594213 FGFR2P21802 821 aa20.01■□□□□ 0.79
GTF2F1-203ENST00000594213 CRHR2Q13324 411 aa20.01■□□□□ 0.79
GTF2F1-203ENST00000594213 METTL24Q5JXM2 366 aa20.01■□□□□ 0.79
GTF2F1-203ENST00000594213 TBC1D22AQ8WUA7 517 aa20.01■□□□□ 0.79
GTF2F1-203ENST00000594213 RFX5P48382 616 aaPredicted RBP20■□□□□ 0.79
GTF2F1-203ENST00000594213 BCAMP50895 628 aa20■□□□□ 0.79
GTF2F1-203ENST00000594213 VPS37DQ86XT2 251 aa20■□□□□ 0.79
GTF2F1-203ENST00000594213 KLHDC4Q8TBB5 520 aa20■□□□□ 0.79
GTF2F1-203ENST00000594213 OPTNQ96CV9 577 aa20■□□□□ 0.79
GTF2F1-203ENST00000594213 ELP3Q9H9T3 547 aa20■□□□□ 0.79
GTF2F1-203ENST00000594213 TRIM17Q9Y577 477 aa20■□□□□ 0.79
GTF2F1-203ENST00000594213 E9PSI1 815 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 MAP3K9P80192 1104 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 CAP1Q01518 475 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 SLFN5Q08AF3 891 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 CHAF1AQ13111 956 aaPredicted RBP19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 CAVIN4Q5BKX8 364 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 OTUD7BQ6GQQ9 843 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 ECM29Q5VYK3 1845 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
GTF2F1-203ENST00000594213 TNNI2P48788 182 aa19.98■□□□□ 0.79
GTF2F1-203ENST00000594213 PRPF38BQ5VTL8 546 aaKnown RBP19.98■□□□□ 0.79
GTF2F1-203ENST00000594213 APOBEC3HQ6NTF7 200 aaKnown RBP19.98■□□□□ 0.79
GTF2F1-203ENST00000594213 BRI3BPQ8WY22 251 aa19.98■□□□□ 0.79
GTF2F1-203ENST00000594213 ZDHHC15Q96MV8 337 aa19.98■□□□□ 0.79
GTF2F1-203ENST00000594213 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
GTF2F1-203ENST00000594213 MKI67P46013 3256 aaKnown RBP19.98■□□□□ 0.79
GTF2F1-203ENST00000594213 VGLL4Q14135 290 aa19.97■□□□□ 0.79
GTF2F1-203ENST00000594213 FKBP1CQ5VVH2 108 aa19.97■□□□□ 0.79
GTF2F1-203ENST00000594213 TEKT1Q969V4 418 aa19.97■□□□□ 0.79
GTF2F1-203ENST00000594213 ERO1AQ96HE7 468 aa19.97■□□□□ 0.79
GTF2F1-203ENST00000594213 PTPN22Q9Y2R2 807 aa19.97■□□□□ 0.79
GTF2F1-203ENST00000594213 CACNB3P54284 484 aa19.96■□□□□ 0.79
GTF2F1-203ENST00000594213 PUM3Q15397 648 aaKnown RBP19.96■□□□□ 0.79
GTF2F1-203ENST00000594213 FAM83AQ86UY5 434 aa19.96■□□□□ 0.79
GTF2F1-203ENST00000594213 CD99L2Q8TCZ2 262 aa19.96■□□□□ 0.79
GTF2F1-203ENST00000594213 CENPFP49454 3210 aa19.96■□□□□ 0.79
GTF2F1-203ENST00000594213 EYA2O00167 538 aa19.95■□□□□ 0.78
GTF2F1-203ENST00000594213 FRAT2O75474 233 aaPredicted RBP19.95■□□□□ 0.78
GTF2F1-203ENST00000594213 SP3Q02447 781 aa19.95■□□□□ 0.78
GTF2F1-203ENST00000594213 ALDH1L2Q3SY69 923 aa19.95■□□□□ 0.78
GTF2F1-203ENST00000594213 HHIPL2Q6UWX4 724 aa19.95■□□□□ 0.78
GTF2F1-203ENST00000594213 LAMB1P07942 1786 aa19.95■□□□□ 0.78
GTF2F1-203ENST00000594213 SPDYE5A6NIY4 337 aa19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 IFIT1P09914 478 aaKnown RBP19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 GTF2A2P52657 109 aa19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 INTS3Q68E01 1043 aaKnown RBP19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 ATG9AQ7Z3C6 839 aa19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 EFCC1Q9HA90 598 aa19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 SNCAIPQ9Y6H5 919 aa19.94■□□□□ 0.78
GTF2F1-203ENST00000594213 CCL15-CCL14A0A0B4J2E2 113 aa19.93■□□□□ 0.78
GTF2F1-203ENST00000594213 CCL15Q16663 113 aa19.93■□□□□ 0.78
GTF2F1-203ENST00000594213 FAM43AQ8N2R8 423 aa19.93■□□□□ 0.78
GTF2F1-203ENST00000594213 LPIN2Q92539 896 aa19.93■□□□□ 0.78
GTF2F1-203ENST00000594213 ARMC5Q96C12 935 aa19.93■□□□□ 0.78
GTF2F1-203ENST00000594213 CSADQ9Y600 493 aa19.93■□□□□ 0.78
GTF2F1-203ENST00000594213 POTEFA5A3E0 1075 aa19.92■□□□□ 0.78
GTF2F1-203ENST00000594213 CDCA7LQ96GN5 454 aa19.92■□□□□ 0.78
GTF2F1-203ENST00000594213 ERO1BQ86YB8 467 aa19.91■□□□□ 0.78
GTF2F1-203ENST00000594213 WDR66Q8TBY9 1149 aa19.91■□□□□ 0.78
GTF2F1-203ENST00000594213 OTUD5Q96G74 571 aa19.91■□□□□ 0.78
GTF2F1-203ENST00000594213 MAST3O60307 1309 aa19.91■□□□□ 0.78
GTF2F1-203ENST00000594213 ARAP2Q8WZ64 1704 aa19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 KIAA0100Q14667 2235 aaKnown RBP19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 BRCA2P51587 3418 aa19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 SLC5A1P13866 664 aa19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 TAF1CQ15572 869 aaPredicted RBP19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 ZKSCAN4Q969J2 545 aaPredicted RBP19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 ZFYVE28Q9HCC9 887 aa19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 TMOD2Q9NZR1 351 aa19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 FBXO3Q9UK99 471 aa19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 RPAP1Q9BWH6 1393 aaPredicted RBP19.9■□□□□ 0.78
GTF2F1-203ENST00000594213 ZBTB22O15209 634 aa19.89■□□□□ 0.77
GTF2F1-203ENST00000594213 WRNIP1Q96S55 665 aa19.89■□□□□ 0.77
GTF2F1-203ENST00000594213 OTOFQ9HC10 1997 aa19.89■□□□□ 0.77
GTF2F1-203ENST00000594213 ZCCHC17Q9NP64 241 aaKnown RBP19.89■□□□□ 0.77
GTF2F1-203ENST00000594213 BTBD19C9JJ37 291 aa19.88■□□□□ 0.77
GTF2F1-203ENST00000594213 IRF6O14896 467 aa19.88■□□□□ 0.77
GTF2F1-203ENST00000594213 CIAO1O76071 339 aa19.88■□□□□ 0.77
GTF2F1-203ENST00000594213 CETPP11597 493 aa19.88■□□□□ 0.77
GTF2F1-203ENST00000594213 FAM151AQ8WW52 585 aa19.88■□□□□ 0.77
GTF2F1-203ENST00000594213 HOOK2Q96ED9 719 aa19.88■□□□□ 0.77
GTF2F1-203ENST00000594213 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
GTF2F1-203ENST00000594213 ZNF112Q9UJU3 913 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms