RNA–Protein interactions for RNA: ENST00000592483.5

CAPNS1-214, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-214ENST00000592483 SLC17A8Q8NDX2 589 aa29.28■■■□□ 2.28
CAPNS1-214ENST00000592483 TTLL11Q8NHH1 800 aa29.28■■■□□ 2.28
CAPNS1-214ENST00000592483 DEFB129Q9H1M3 183 aa29.28■■■□□ 2.28
CAPNS1-214ENST00000592483 COL1A1P02452 1464 aaPredicted RBP29.28■■■□□ 2.28
CAPNS1-214ENST00000592483 WTIPA6NIX2 430 aaPredicted RBP29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 PPP1R12BO60237 982 aaPredicted RBP29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 CAP1Q01518 475 aa29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 CEP85Q6P2H3 762 aa29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 LMBR1LQ6UX01 489 aa29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 FBXW7Q969H0 707 aa29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 ZBED3Q96IU2 234 aaPredicted RBP29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 C1orf115Q9H7X2 142 aa29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 RANBP2P49792 3224 aaKnown RBP29.27■■■□□ 2.28
CAPNS1-214ENST00000592483 ATP8B2P98198 1209 aa29.26■■■□□ 2.27
CAPNS1-214ENST00000592483 SLC4A8Q2Y0W8 1093 aa29.26■■■□□ 2.27
CAPNS1-214ENST00000592483 SLC9C1Q4G0N8 1177 aa29.26■■■□□ 2.27
CAPNS1-214ENST00000592483 COA1Q9GZY4 146 aa29.26■■■□□ 2.27
CAPNS1-214ENST00000592483 ZNF646O15015 1829 aaPredicted RBP29.25■■■□□ 2.27
CAPNS1-214ENST00000592483 HMMRO75330 724 aa29.25■■■□□ 2.27
CAPNS1-214ENST00000592483 ARHGEF6Q15052 776 aa29.25■■■□□ 2.27
CAPNS1-214ENST00000592483 CHRDL2Q6WN34 429 aa29.25■■■□□ 2.27
CAPNS1-214ENST00000592483 CUL9Q8IWT3 2517 aa29.24■■■□□ 2.27
CAPNS1-214ENST00000592483 CCDC85AQ96PX6 553 aaPredicted RBP29.24■■■□□ 2.27
CAPNS1-214ENST00000592483 TESPA1A2RU30 521 aaPredicted RBP29.23■■■□□ 2.27
CAPNS1-214ENST00000592483 PTPN18Q99952 460 aa29.23■■■□□ 2.27
CAPNS1-214ENST00000592483 CCDC57Q2TAC2 916 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 TTLL5Q6EMB2 1281 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 KIAA0825Q8IV33 1275 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 MINPP1Q9UNW1 487 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 CHMP3Q9Y3E7 222 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 PPP2R3BQ9Y5P8 575 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 PTCH2Q9Y6C5 1203 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 A0A0C4DFX4 3053 aa29.22■■■□□ 2.27
CAPNS1-214ENST00000592483 SRGAP3O43295 1099 aa29.21■■■□□ 2.27
CAPNS1-214ENST00000592483 IFIT5Q13325 482 aaKnown RBP29.21■■■□□ 2.27
CAPNS1-214ENST00000592483 SUPT20HL1Q3ZLR7 823 aa29.21■■■□□ 2.27
CAPNS1-214ENST00000592483 SSH3Q8TE77 659 aa29.21■■■□□ 2.27
CAPNS1-214ENST00000592483 CDC5LQ99459 802 aaKnown RBP29.21■■■□□ 2.27
CAPNS1-214ENST00000592483 RBM27Q9P2N5 1060 aaKnown RBP29.21■■■□□ 2.27
CAPNS1-214ENST00000592483 ANKRD18BA2A2Z9 1011 aa29.2■■■□□ 2.26
CAPNS1-214ENST00000592483 POLA2Q14181 598 aa29.2■■■□□ 2.26
CAPNS1-214ENST00000592483 GREM2Q9H772 168 aa29.2■■■□□ 2.26
CAPNS1-214ENST00000592483 BSDC1Q9NW68 430 aaPredicted RBP29.2■■■□□ 2.26
CAPNS1-214ENST00000592483 PCDHB15Q9Y5E8 787 aa29.2■■■□□ 2.26
CAPNS1-214ENST00000592483 SSC5DA1L4H1 1573 aa29.19■■■□□ 2.26
CAPNS1-214ENST00000592483 ITGA6P23229 1130 aa29.19■■■□□ 2.26
CAPNS1-214ENST00000592483 GJA5P36382 358 aa29.19■■■□□ 2.26
CAPNS1-214ENST00000592483 HDAC1Q13547 482 aaPredicted RBP29.18■■■□□ 2.26
CAPNS1-214ENST00000592483 PNMA6EA0A0J9YXQ4 647 aa29.17■■■□□ 2.26
CAPNS1-214ENST00000592483 IREB2P48200 963 aaKnown RBP29.17■■■□□ 2.26
CAPNS1-214ENST00000592483 DLGAP5Q15398 846 aa29.17■■■□□ 2.26
CAPNS1-214ENST00000592483 TXNRD3Q86VQ6 643 aa29.17■■■□□ 2.26
CAPNS1-214ENST00000592483 FBXO3Q9UK99 471 aa29.17■■■□□ 2.26
CAPNS1-214ENST00000592483 COPRSQ9NQ92 184 aa29.16■■■□□ 2.26
CAPNS1-214ENST00000592483 RFX5P48382 616 aaPredicted RBP29.15■■■□□ 2.26
CAPNS1-214ENST00000592483 TAF7LQ5H9L4 462 aa29.15■■■□□ 2.26
CAPNS1-214ENST00000592483 SIRT2Q8IXJ6 389 aa29.15■■■□□ 2.26
CAPNS1-214ENST00000592483 ANKRD13AQ8IZ07 590 aa29.15■■■□□ 2.26
CAPNS1-214ENST00000592483 MTMR14Q8NCE2 650 aa29.15■■■□□ 2.26
CAPNS1-214ENST00000592483 RWDD1Q9H446 243 aaPredicted RBP29.15■■■□□ 2.26
CAPNS1-214ENST00000592483 LEMD3Q9Y2U8 911 aa29.15■■■□□ 2.26
CAPNS1-214ENST00000592483 USP2O75604 605 aaPredicted RBP29.14■■■□□ 2.26
CAPNS1-214ENST00000592483 MYCP01106 439 aaPredicted RBP29.14■■■□□ 2.26
CAPNS1-214ENST00000592483 ZNF804BA4D1E1 1349 aa29.14■■■□□ 2.25
CAPNS1-214ENST00000592483 IGHMBP2P38935 993 aaKnown RBP29.13■■■□□ 2.25
CAPNS1-214ENST00000592483 GTF2IP78347 998 aa29.13■■■□□ 2.25
CAPNS1-214ENST00000592483 DPF3Q92784 378 aa29.13■■■□□ 2.25
CAPNS1-214ENST00000592483 ZFYVE28Q9HCC9 887 aa29.13■■■□□ 2.25
CAPNS1-214ENST00000592483 HSP90AB4PQ58FF6 505 aa29.12■■■□□ 2.25
CAPNS1-214ENST00000592483 NBPF12Q5TAG4 269 aaPredicted RBP29.12■■■□□ 2.25
CAPNS1-214ENST00000592483 MS4A4AQ96JQ5 239 aa29.12■■■□□ 2.25
CAPNS1-214ENST00000592483 COL6A3P12111 3177 aa29.12■■■□□ 2.25
CAPNS1-214ENST00000592483 PPP4R2Q9NY27 417 aa29.11■■■□□ 2.25
CAPNS1-214ENST00000592483 NOP58Q9Y2X3 529 aaKnown RBP29.11■■■□□ 2.25
CAPNS1-214ENST00000592483 MYO1BO43795 1136 aa29.1■■■□□ 2.25
CAPNS1-214ENST00000592483 CIAO1O76071 339 aa29.1■■■□□ 2.25
CAPNS1-214ENST00000592483 TAF1CQ15572 869 aaPredicted RBP29.1■■■□□ 2.25
CAPNS1-214ENST00000592483 SH3TC2Q8TF17 1288 aa29.1■■■□□ 2.25
CAPNS1-214ENST00000592483 OPTNQ96CV9 577 aa29.1■■■□□ 2.25
CAPNS1-214ENST00000592483 MPHOSPH8Q99549 860 aa29.1■■■□□ 2.25
CAPNS1-214ENST00000592483 PRO3102Q9H379 93 aa29.1■■■□□ 2.25
CAPNS1-214ENST00000592483 EYA2O00167 538 aa29.07■■■□□ 2.24
CAPNS1-214ENST00000592483 LDHAL6AQ6ZMR3 332 aa29.07■■■□□ 2.24
CAPNS1-214ENST00000592483 BRI3BPQ8WY22 251 aa29.07■■■□□ 2.24
CAPNS1-214ENST00000592483 DCTPP1Q9H773 170 aa29.07■■■□□ 2.24
CAPNS1-214ENST00000592483 ELP3Q9H9T3 547 aa29.07■■■□□ 2.24
CAPNS1-214ENST00000592483 ECM29Q5VYK3 1845 aa29.06■■■□□ 2.24
CAPNS1-214ENST00000592483 CLRN2A0PK11 232 aa29.06■■■□□ 2.24
CAPNS1-214ENST00000592483 KLRK1P26718 216 aa29.06■■■□□ 2.24
CAPNS1-214ENST00000592483 G3BP1Q13283 466 aaKnown RBP eCLIP29.06■■■□□ 2.242e-7■■□□□ 14
CAPNS1-214ENST00000592483 ERC1Q8IUD2 1116 aa29.06■■■□□ 2.24
CAPNS1-214ENST00000592483 PCDHAC2Q9Y5I4 1007 aa29.06■■■□□ 2.24
CAPNS1-214ENST00000592483 SPDYE2BA6NHP3 402 aa29.05■■■□□ 2.24
CAPNS1-214ENST00000592483 RAB11FIP3O75154 756 aa29.05■■■□□ 2.24
CAPNS1-214ENST00000592483 SURF6O75683 361 aaKnown RBP29.05■■■□□ 2.24
CAPNS1-214ENST00000592483 GNRH1P01148 92 aa29.05■■■□□ 2.24
CAPNS1-214ENST00000592483 SPDYE6P0CI01 402 aa29.05■■■□□ 2.24
CAPNS1-214ENST00000592483 IL15P40933 162 aaPredicted RBP29.05■■■□□ 2.24
CAPNS1-214ENST00000592483 CERS5Q8N5B7 392 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms