RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
CAPNS1-213ENST00000592354 WNK4Q96J92 1243 aa16.89■□□□□ 0.29
CAPNS1-213ENST00000592354 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
CAPNS1-213ENST00000592354 FGFR2P21802 821 aa16.88■□□□□ 0.29
CAPNS1-213ENST00000592354 CACNB3P54284 484 aa16.88■□□□□ 0.29
CAPNS1-213ENST00000592354 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 SLC5A1P13866 664 aa16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 SOX10P56693 466 aa16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 MLLT1Q03111 559 aaPredicted RBP16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 TBC1D22AQ8WUA7 517 aa16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 TMEM39BQ9GZU3 492 aa16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 R3HDMLQ9H3Y0 253 aa16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 LRRFIP2Q9Y608 721 aaKnown RBP16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
CAPNS1-213ENST00000592354 GPR25O00155 361 aa16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 USP2O75604 605 aaPredicted RBP16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 ZBTB48P10074 688 aaPredicted RBP16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 GJA5P36382 358 aa16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 TEKT1Q969V4 418 aa16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 TEPSINQ96N21 525 aa16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 MEIS3Q99687 375 aa16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 API5Q9BZZ5 524 aaKnown RBP16.86■□□□□ 0.29
CAPNS1-213ENST00000592354 MANSC4A6NHS7 340 aaPredicted RBP16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 IGF2BP3O00425 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 ANKRD13AQ8IZ07 590 aa16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 LPIN2Q92539 896 aa16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 ELP3Q9H9T3 547 aa16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 PA2G4Q9UQ80 394 aaKnown RBP16.85■□□□□ 0.29
CAPNS1-213ENST00000592354 TNNI2P48788 182 aa16.84■□□□□ 0.29
CAPNS1-213ENST00000592354 RGS19P49795 217 aa16.84■□□□□ 0.29
CAPNS1-213ENST00000592354 IFNL1Q8IU54 200 aa16.84■□□□□ 0.29
CAPNS1-213ENST00000592354 MAST3O60307 1309 aa16.84■□□□□ 0.29
CAPNS1-213ENST00000592354 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
CAPNS1-213ENST00000592354 ATP2B3Q16720 1220 aa16.83■□□□□ 0.28
CAPNS1-213ENST00000592354 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
CAPNS1-213ENST00000592354 OPTNQ96CV9 577 aa16.83■□□□□ 0.28
CAPNS1-213ENST00000592354 ZDHHC15Q96MV8 337 aa16.83■□□□□ 0.28
CAPNS1-213ENST00000592354 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
CAPNS1-213ENST00000592354 DOCK2Q92608 1830 aa16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 FKTNO75072 461 aa16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 CIAO1O76071 339 aa16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 ALDH1A1P00352 501 aa16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 VGLL4Q14135 290 aa16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 CFHR5Q9BXR6 569 aa16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
CAPNS1-213ENST00000592354 UNCXA6NJT0 531 aa16.81■□□□□ 0.28
CAPNS1-213ENST00000592354 APOBEC3HQ6NTF7 200 aaKnown RBP16.81■□□□□ 0.28
CAPNS1-213ENST00000592354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.282e-7■□□□□ 8.1
CAPNS1-213ENST00000592354 CEP126Q9P2H0 1117 aa16.81■□□□□ 0.28
CAPNS1-213ENST00000592354 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
CAPNS1-213ENST00000592354 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 PRDX5P30044 214 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 PHKA1P46020 1223 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 INHBEP58166 350 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 CRHR2Q13324 411 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 DIXDC1Q155Q3 683 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 MYH2Q9UKX2 1941 aa16.8■□□□□ 0.28
CAPNS1-213ENST00000592354 RPAP1Q9BWH6 1393 aaPredicted RBP16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 ADORA1P30542 326 aa16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 IL15P40933 162 aaPredicted RBP16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 PTPN18Q99952 460 aa16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 DAGLAQ9Y4D2 1042 aa16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 CSADQ9Y600 493 aa16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 ZSWIM8A7E2V4 1837 aa16.79■□□□□ 0.28
CAPNS1-213ENST00000592354 INTS3Q68E01 1043 aaKnown RBP16.78■□□□□ 0.28
CAPNS1-213ENST00000592354 FBXO46Q6PJ61 603 aaPredicted RBP16.78■□□□□ 0.28
CAPNS1-213ENST00000592354 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
CAPNS1-213ENST00000592354 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
CAPNS1-213ENST00000592354 WRNIP1Q96S55 665 aa16.78■□□□□ 0.28
CAPNS1-213ENST00000592354 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
CAPNS1-213ENST00000592354 SRGAP3O43295 1099 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 BCAR3O75815 825 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 TRIM27P14373 513 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 MAP3K9P80192 1104 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 TCP10Q12799 353 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 FAM83AQ86UY5 434 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 BRI3BPQ8WY22 251 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 MS4A4AQ96JQ5 239 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 COPRSQ9NQ92 184 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 GNL3LQ9NVN8 582 aaKnown RBP16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 SNCAIPQ9Y6H5 919 aa16.77■□□□□ 0.28
CAPNS1-213ENST00000592354 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.27
CAPNS1-213ENST00000592354 CCL15-CCL14A0A0B4J2E2 113 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 LDHBP07195 334 aaKnown RBP16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 GNAI3P08754 354 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 CCL15Q16663 113 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms